Gene RoseRS_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1282 
Symbol 
ID5208234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1586651 
End bp1587541 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content63% 
IMG OID640594897 
Productrod shape-determining protein MreC 
Protein accessionYP_001275636 
Protein GI148655431 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCG ATCGCCCATA CCGACTGTCA CAACCGGCGC GACGTTCGCC ATTGCTGATA 
ATCCTGCTGG TGCTGATCGC AGCGGCGTTG CTGGCTGCCG ATCAGGCCGG GTTGCTCGGT
CCGTTGCGTC TCCATGCCCA GGCGATCATC AGCCCGGTGC TGGTCAGAAT GCAGCAGATG
GGCGCCTGGA TCGAGTCGCT CGTCGGGCAG GCGAGTGATG ATCAGGCGCT TCTGGCGGAA
CTCGAGGCGC TGCGTGCGGA GAACGCCGAT TTGAAGGCGC GGTTGATCCA GGCGGAGGCG
CTGGAGTTCG AAAATGCGCG CCTGCGTGAA CAGGTGCGTA TCGAGCAGGC GTATCCCTGG
CAGTTGCTGG GCGCAGATGT GATTGCACGT ACTCCCGACA CCGGTCGTCG CCTGGTGTTG
TTTGCTGCTG GCACGGATCA GGGGGTGCGT CCGGGAATGG CGGTCATTGC GCGTGAGGGG
AGCAATCCTC CCGCTCTGAT CGGTATCGTT GAGGAGGCGG GTCCGCGCAC CGCCTCGGTG
CTCTTGATCA CCGACTATAG CAGTGCGATC AGCGCACAGG TGTACCAGGA AACCGATGTT
GTTCGCGGTG TGATCCAGGG GCAGTGGCAG CGCGGATCGC GCCTGCTCTT GCACTCGGTT
GCGCGTGAAG CGCCGCTGGC GGCTGGCAAC ACGGTGCTGA CCGCCGGTCT GTCGGCGGAA
CTGGCGCTCA GTGTGCCTCG CGCGGCAGTT CCGCCAAATG TGCCGATTGG CGTGATCGAG
ATGGTCCAGG ATACCGGGCG TGATCGCATT GCCGGGGTGC GTCCATTTGT TGATCCTGAT
CGGGTACGTT ACGCATGGGT CATTCTCGCC AGCGACGAAT CGAAGAAATA A
 
Protein sequence
MLRDRPYRLS QPARRSPLLI ILLVLIAAAL LAADQAGLLG PLRLHAQAII SPVLVRMQQM 
GAWIESLVGQ ASDDQALLAE LEALRAENAD LKARLIQAEA LEFENARLRE QVRIEQAYPW
QLLGADVIAR TPDTGRRLVL FAAGTDQGVR PGMAVIAREG SNPPALIGIV EEAGPRTASV
LLITDYSSAI SAQVYQETDV VRGVIQGQWQ RGSRLLLHSV AREAPLAAGN TVLTAGLSAE
LALSVPRAAV PPNVPIGVIE MVQDTGRDRI AGVRPFVDPD RVRYAWVILA SDESKK