Gene RoseRS_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1280 
Symbol 
ID5208232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1583292 
End bp1585958 
Gene Length2667 bp 
Protein Length888 aa 
Translation table11 
GC content59% 
IMG OID640594895 
Productpeptidoglycan glycosyltransferase 
Protein accessionYP_001275634 
Protein GI148655429 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.547903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTA TCCGTGGTCT GCAAATAACC GTTCTTCTCA TATTTGCCAT CCTGATTGGA 
CGGTTATATC AGTTACAACT GGTCGATGCC CAGGCGGATC AGTACCGTTA CTCAACGGCA
GTGCGCGTCA TGCGTTACCT GCCGATGCGC CCGATGCGCG GCGAAATATT TGCCAGCGAT
GGGCGTACCC TGCTCGCGCA GACGGTTCCG ATCTACACGC TTGCTATCCG CCCCGCCGAT
CTCCCTGCCG ATCCCGCGTC TCGTGCGCAG GTGTTTGCGC ATCTCAGTCA GACGATTGGG
ATAACCAGCA CCCTGATCAT TTCTCCAGCC GCTGCCCTTG AACGCGACCC GGTTCTGCGC
AGTGATCTGG TTCAGGGTCT TGGCGCTGAA GCTGTCGCAC GCGCGCAACG CATCGAGCCG
CCGTTCACTG CATTGCTCGC GGTGGCGCCT GATCAACGTC CTGCGCTGGA CGCACTGACG
GCGCGCTATC ATCAGGTGGT GCAGTTTGCG CCCCAAACGC TGGATATCGA CGCAGCGCCA
GCGCTGGCGC CTTCCCCGCC GATCTCGGTG ACGCTCACGA TCTCACCGGC ATCAGCGTTG
CAGTACAACC TGGCGCTGCG CGAAGATCTC GTGCGCGTGC TGGGTGACCG CGCAATCGAA
CCGCTGGAAG TGCCTCCTGT GTGGCTGCGC ATCGATGTGC CGCCTTCTGT GATGCTCAAT
GCGCTGCGCT TATCGACAGC GTACAGTGAC GTGGCAACAC TGGAAAACCC GATTGCCAGC
ATGGTCGAAC GGGCGAACAT TCCCGGCTAC CAGACCGTGA CCATTCGCGA AGATATTCCA
CATTCCATCG CGCTGGCATT GATCGAAAAC GCTGCCACGC TGCGGGGGGT TGTCATCGAA
CAGGATTATC GCCGACGGTA TCCGTTGAGT ACCGAAACGC CGTCACTGTC ATACATCCTG
GGGTACATCG GTCGAGTAAA CCAGTGCGAA CTTGTGCGTC AGAATCCGGC GCGCTCATGG
ATGAGCGGGT TGCTCGAGTC GATCGGCAGT TCGATCGAGT GTGGCATCAT TCAGAAACAG
ATCAACCCCT ACGAATTGGG GTTGCCCCGC TATCTGCCGG ATGATCGGAT CGGCAAGTTC
GGCGTCGAAG CCAGTTACGA AGAGGAGTTG CGCGGGCAAC TCGGCATGCA GGAGGTGCTC
GTTGATGCGC TCGGTCGTCC GGTGCGTCCG CCGCAGACGA TCAAAGCGCC GCGCGATGGG
TATAACCTGG TGTTGACCAT CGATGCACAG TTGCAGCGTC AGACGGAACA GATTCTGCGC
AACTGGATCG AAGAGAGCGA ACGCCGCCGT CAGACGATGC CGGATCGTTT CGCCTACAAG
CGCAACTACG ACCCGATCCG TAGCGGCGTG GCAATCGTCG TTGAAGTGAA GACCGGTCGG
ATTCTGGCGA TGGTTAACTG GCCCGCCTAT GACAACAATA TCTGGGACCC GACGCGCGCG
GCGGAGTTGC AGGAACTCTT CTTCCCCCGC GATCCGGAGA AGCAGAAAGA GCTGGCGCGT
CTCTCGCTGC AGGTCAATCG CGCGATCAGC GGTCAGTACC CGCCCGGTTC GACGCTCAAG
CAGTTCGATG CAGCCATTGC ACTCCAGAAG GGTATCATTA CAGAGAACAC CAGAATTCGT
GATCCTGGTA AATTGCTGGT TGAGGATCAG TATGTACCCG GCGTGGTGTA TCAGTATGTC
AACGCTTCAT CACGCGATAA CGGAATGATC GATGTGCGCC AGGCGCTGAA GGTTTCGTCG
AATATCTTCT TTATGTCGGT GGCGGGCGGC AACCGGGAAA ATGTGATTAA TCTCAAACCA
GAAGAGCAGA TCATCGACAA AGGGTTGGGT ATCACTGCTC TGGCAGAAGG GCTTGGATGG
TTTGGCTTTG GTGAACCGAC CGGCGTGCAT CTGCGCGGGG AAGAAGCCGG GCGGGTGCCG
ACGCCCGCCT GGAAGCAGCG GGTGCTTCGT TCGGCATGGA CAACCGGTGA TACCTATAAT
GCTGCAATCG GTCAGGGGAA CCTGGAAGTG ACCCCGCTCC AACTGGTGAT GGCGTCGGCT
GCGATTGCCA ATGGCGGGTT TCTCTACCGC CCGCAGATCG TTCGTGCAAT AACCGATGCG
AATGGGAATG TTGTGCGCGA CATTCAACCT GAACTGATCC GCCGCATTCC CGTTGATCCC
AGGCATCTCC AGGTCGTTCG TGAGGGGATG CGGTTGTCGG TTACCGAAGG TTCAAGCATC
GCGGCGCGCG ATCAGTGCTC CGGGTTGAGC ATTGCCGGAA AAACCGGCAC CGCTGAGTTC
GGTCCGCTGA TCACCATTCC CGCTCCCGAT GGCAGAGGAA CACGGGAAGT GCGCCAGAGC
CACGCCTGGT TCGTCGGTTT TGCGCCTTAC GAGGATCCGG AGATCGAGGT GCTGGTGCTG
GTCGAGGGCG CTGGCGATAT GAATGATGGT TCGGCAACGA TTGCCGTGCC AGCGGTAACG
CAGATCATGC AGGCGTATTT TGGCGTCACA CCACCCGATC CGCTGCCGCG TGGATGTCAG
CAGGGCATGC CACCGCTGCC GCCGCGCTTC ACTCCTTCGT CCCCTGAACC TGCCGCGAAT
CCGCAGCCGG TCGGTCAGCG GCGATGA
 
Protein sequence
MKRIRGLQIT VLLIFAILIG RLYQLQLVDA QADQYRYSTA VRVMRYLPMR PMRGEIFASD 
GRTLLAQTVP IYTLAIRPAD LPADPASRAQ VFAHLSQTIG ITSTLIISPA AALERDPVLR
SDLVQGLGAE AVARAQRIEP PFTALLAVAP DQRPALDALT ARYHQVVQFA PQTLDIDAAP
ALAPSPPISV TLTISPASAL QYNLALREDL VRVLGDRAIE PLEVPPVWLR IDVPPSVMLN
ALRLSTAYSD VATLENPIAS MVERANIPGY QTVTIREDIP HSIALALIEN AATLRGVVIE
QDYRRRYPLS TETPSLSYIL GYIGRVNQCE LVRQNPARSW MSGLLESIGS SIECGIIQKQ
INPYELGLPR YLPDDRIGKF GVEASYEEEL RGQLGMQEVL VDALGRPVRP PQTIKAPRDG
YNLVLTIDAQ LQRQTEQILR NWIEESERRR QTMPDRFAYK RNYDPIRSGV AIVVEVKTGR
ILAMVNWPAY DNNIWDPTRA AELQELFFPR DPEKQKELAR LSLQVNRAIS GQYPPGSTLK
QFDAAIALQK GIITENTRIR DPGKLLVEDQ YVPGVVYQYV NASSRDNGMI DVRQALKVSS
NIFFMSVAGG NRENVINLKP EEQIIDKGLG ITALAEGLGW FGFGEPTGVH LRGEEAGRVP
TPAWKQRVLR SAWTTGDTYN AAIGQGNLEV TPLQLVMASA AIANGGFLYR PQIVRAITDA
NGNVVRDIQP ELIRRIPVDP RHLQVVREGM RLSVTEGSSI AARDQCSGLS IAGKTGTAEF
GPLITIPAPD GRGTREVRQS HAWFVGFAPY EDPEIEVLVL VEGAGDMNDG SATIAVPAVT
QIMQAYFGVT PPDPLPRGCQ QGMPPLPPRF TPSSPEPAAN PQPVGQRR