| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1276 |
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| Symbol | |
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| ID | 5208228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1579679 |
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| End bp | 1580614 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640594891 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001275630 |
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| Protein GI | 148655425 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGCA TGCTGCCGAT GATCGGATTC GGGGTGCTGA TGCTGCTTGG CGTTGGGCTG
ATTATGATCG GCATGCGGCG CTCCTCGCAG CCCGATATGA TCAGCGACCG ACTCAGTCAG
TTTACCGAGC GCACGATGAC GCTCGAAGAA ATGGAACTGC AACAACCGTT TAGTCAGCGT
GTGCTCGTGC CGCTCACCAA GAGCATCCTG GCAAAACTCG GTCAGTATGG TCCGAAACAG
AGCGCCGAGC GCCTGCGGAT CAGTCTGGCG CAGGCAGGTA ATCCGGGGAA CCTGACCCCG
ATGCAGTTTA GCGGCATTCG CCTGGCGCTG GCGGTTGTGC TGTTTATCGT TGTCGGTGCA
GTGACGTTCT TGCAGGGCAT GGACGTCGCA CAGGCGATGA TGTATACCGC CATCGGCGCA
GGAATGGGAT ACCTGTTGCC GGGCATCTGG CTCGGACAGC AGATCAAGAA GCGCAAGAAG
GCGATTGTCA AGGCGCTGCC CGACGCACTC GATCTGTTGT GCATCTGTGT CGAAGCCGGG
TTGTCGTTCG ACCAGGCAAT GCAGCGCCTG ACCGAAAAGT GGGACGATCC GCTTTCGAAG
GAGTTCAAGC GCGTGCTCAG CGATACGCGG CTTGGTCGTC CCCGCCGTGA TGCGATGAAG
GATATGATCG ACCGCTGTGG CGTCGATGAT GTGCAGACGT TCATCGGCGC CGTGATCCAG
GCGGAACAAC TTGGCGTGTC GATCGGGCGT ATTCTGCGCA TTCAGTCGGA TCAGATGCGC
ATCCGCCGCC GCCAGCGCGC CGAAGAGGAG GCGCATAAGG CGCCGATCAA AATGCTCTTC
CCCATGGTGT TCCTGATCTT CCCGGCATTG TTCATCGTCA TCCTCGGTCC GGCAGTCCCG
CGGATTATGA AGTCGCTCGG CGGGCTGGGG GGATAG
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| Protein sequence | MAGMLPMIGF GVLMLLGVGL IMIGMRRSSQ PDMISDRLSQ FTERTMTLEE MELQQPFSQR
VLVPLTKSIL AKLGQYGPKQ SAERLRISLA QAGNPGNLTP MQFSGIRLAL AVVLFIVVGA
VTFLQGMDVA QAMMYTAIGA GMGYLLPGIW LGQQIKKRKK AIVKALPDAL DLLCICVEAG
LSFDQAMQRL TEKWDDPLSK EFKRVLSDTR LGRPRRDAMK DMIDRCGVDD VQTFIGAVIQ
AEQLGVSIGR ILRIQSDQMR IRRRQRAEEE AHKAPIKMLF PMVFLIFPAL FIVILGPAVP
RIMKSLGGLG G
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