| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1266 |
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| Symbol | |
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| ID | 5208218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1560445 |
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| End bp | 1564593 |
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| Gene Length | 4149 bp |
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| Protein Length | 1382 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640594882 |
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| Product | hypothetical protein |
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| Protein accession | YP_001275621 |
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| Protein GI | 148655416 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.146647 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATGCA CGGTCTTCCC GTGTACGTGC GGAGAATACC CAACATCGAT AGCAGCCGGT
TCTCAGTTCT CAGTTCTTGG TTCTCAGTTC CTGGTGACAA CTATCGCTCC CGCTACCCTG
ACACTCATCA TTCTGGCGCT CATACTCACC GGCGCGTTGA TCGCGCGCGC GTTGCCGGTT
GCCTGGCGTA GCAGCGATCC GATCGAACGC TGGTTCGAAT ATGCCCTGAT CGGCGCGCTG
CTAAACGGAT GGCTGGCATT CACCCTGGCG CAGATTGGCA TCTTCTCTGC GCCGCTGCAT
GGCGCTGTGG TTGCCGTTCT GTGCATCATC GCCGCACTGA TCCGCCGCGC ATCCGGCAGT
CAACCCGCCA CGCCCGATGT TCAACCTTCA GCACCTGGCG TTCCACCTGC CGCGCCCGAC
GTTCCACCTT CAACGTTCAA CGTTCCACCT GCCACGCCCG ACGGTCCACC TTCAACGTTC
AACGTTCCAC CCGCCACGCC CGACGTTCCA CCCGCCACGC CCGACGTTCC ACCTGCCACG
CCCGACGTTC CACCCGCCAC GCCCGACGTT CCACCTTCCA CGTTCAACGT TCCACCTTCA
ACGTCCGACG TTCCACCCGC CACGCCCGAC GTGCCACCTT CAACCTTCAA CCTTCAACCT
TCAACCTTCA ACCTCCCACG CCCAACCTTC AACCTTCAAC GCCCAACCTT CAACCTTCTC
CTCTCCGCCA TCCTGCTGCT CTTCGTCTTC CTCGTCACTC CTCCGTTCGA GACGATCATC
GGTGTGCGTG ATGCGGGCGT CTATGCGAAT GCAGGGTTCA TCATGGTACG CACCGGTTCA
CTGACCTTTA CCGATCCGCT GGTGGCGCAG ATCGCCGCCG ATCAACAATC TCCCGATCCA
TCGCTCGCCG ATGCCGCCCG TCAGGCGGAA ACCAACGTTC TCGGCGTGCA GAATGCGCAG
CGCTTCATTG CCACCCGCCT GCGCGCCGCA GGGTTTTTTA TCGATCAGGG CGACCTTGCA
CGCGGGCGTG TCGTCCCGCA AGGATTGCAC CTCTTCTCCG CCTGGATTGG ATTGCTCGCC
GCGTTCTTCG GGATGCACGG CGGATTGCTG GCGCCAGCGG TTACCGGTCT ACTGGGGGTC
TGGAGCGTCG CTTTGCTCGG TCGGCGCATC GCCGGTCCGT GGGTCGGACT GCTGGCGGCG
CTCTTCCTTG CGCTTAGTGC CGTTCAGGTC TGGTTCAGTC GCTATTCCAC CGCCGAAACA
ACAGCGCAGT TCCTCATCTT TGCTGGACTC TACGCCTTCG CTAGAGCCTT CGGATCTTCG
ACGTTCAACG TTCAACGTTC CACACCCAAC CTTCAACCTT CAACCCTCAA CGTTGAACGT
TCAACGCCCA ACGTTCCACT TTCCGCGTCC AACGTTCAAC GTTCAACCTT CAACGTTCAA
CCTTCAACGT TCAACGTTCA ACCTTCAACC TTCAACGTTC CACCTTCCAC CAACGTTCAA
CCTTCAACGT TCAACGTTCC ACCTTCCACC AACGTTCAAC CTTCAACGTT CAACCTTCAA
CCTTCAACCT TCAACCTTCA ACCTTCAACC TTCCACGCCC TGCTCGCCGG GCTGGCATTC
GGACAACTCG CCCTGACGCG CATCGAGTTC TTCCTGGTCA CAGGACCGCT GGCGCTCTAC
CTGATCTTCA TCTGGCTTGC GCGCCGCTGG ACGCTGCCGC ACACTGCGCT GCTGGCGGGC
GCCGGGGTGA TGCTGCTCCA CGCCGGATTG CAGATCGTGT TCCTGGCGCG CGCCTATTTC
TTCGATACGC TCTTCGCCCG TCTGCAAGAT TTTGCGCTCA CCGCAGCCCT GGCGTTGCCG
TTTCTCACCC CCACGTTGCG CCAGGTCTAT CTGCTGCGCC CCTGCTCGCG CCTGACGATG
CAACCATGCC CGCCGATCGC CGGGATGCCG CCGACCGCCG ATGCACCGCT CAACTGGGCG
CGTATCGGCA CCGAACTTTT CGTCGTCATC CTGATCATCA TCGCCTTGAT CGTGGTGCGT
CGCCTGAGTC TGGTCGCCCA CTTCGTATCG CTGCTTGCGC GTCTGAGCCA TCCGCTGCGC
CTGATCGCTG CGGTTGTCGT CATTGTGCTG GGAGGGTATA CGTACCTTAT CCGCCCGCAG
ATCCTGTCGC CTGCGACCAT CGCCGCGCTG CCCGCCTGCC TGACGCCGGC GCAACTGACC
AGCCCACAGG GCGCGTGTCT GACCCTCCAG GGGTATGTCG GGGCGCCGAT TGCCACTCCC
GCGTATGTCG ATCCGCTCGC CGGATGGATC GATCATCTCA TCGGTATGGC GCGCGGTCGT
TCCAACCCGC CGCGCGAAGC CTGCATTGCG CTGCGCCGCG AGACGCTGCC GCCATCCGCC
GATGGGCGCA CCATGCCGGA AGTCCTTCGA GACGGTCTGA TCCGCGAGGC GGACGTTGCG
CCGGAGATCC TCGCCGATCT GCGCGCCTGC GACCGCTATG TGCTGCGTGA CCTGTTCGGC
GTGGCGCAGG CGAACCTGGT GCGCCTGGGA TGGTACCTGT CGCCGCTGGG GATTGCACTC
GCGCTTGCCG GTCTGGCGCT GATGGTCTAC CGCATCAACG CGACCTCCTG GCTGTTCCTG
GTTATTGCCG CCGTTGCATC GGTGGTCTTC CTGCGGCTGA CCTACGGCGC CAGCGATCAG
CACTATATCT ACATCATGCG ACGCTACGTG CCGCACGTCT ATCCGGCGTT CGCCATCGGC
ATCGCTTACG CCATCGCGCA TCTGACGCTC GATCTGCGAT TGTTCGCCGA TATGCTGCGA
TCCATCGCAC GAAAGGCGCA TCGCAACGCC TCAACAGGAC TGCAACGTCC AACAACGTTC
AACGTTCAAG GTTCAATAGC GTTCAACGTT CAAGGTTCAA TGTTCAGGGT TCCACCTTCA
ACCCCCAACC TTCAACCTTC AACCTTCAAC CCCCAACCTT CAACCCCCAA CCTTCAACCT
TCAACCCCAA ACCTTCAACC CCCAACCTTC AACCTTCGCG TTCTCCTCAC CCTCGCCCTT
GTCCTGTTCC TGGTCGTCAC CGGCAGACCG ATCTACCGTC ACACCGAATA TGCCGGAGCG
ATCACCCAGA TCGGCGCAAT GGCAGCCCAA CTCGATCCGG GCGCGATTGT GCTCATGCGC
GGCGGCGCTC CATCGTATGC ACAGGCGCGT GACATTCCCG ATCTGCTGGC AACACCGCTC
ACCTTCGGGT TTGGTGTTGA CGCATTCGCG CTGAAGAGTC GCGATCCCGG ACGGTATGCA
CCGCAACTGG CGCGCTACAT CCGTCGCTGG CACGATCAGG GGCGCCCGGT GTACCTGGCG
GTCAGCGCCA GCGGTGCGCT GACCCTCCCC GGATGGCGTC TTGAACCGGT CGGGCGATTC
CTCCTCGACC TGCCGGAATA TGAACAACCG ACCGATCACA AACCTTCCGC CGTGCAGCGG
TTTACCCTCG ATTTTGCGCT CTATCGCCTG ACACCCGGCG CCGCAGGAGA AACGCCGCCG
GTCATTCTGC CCGACGACTA CGCCTACCAG GTGCGCGGGG TCTACCGTGC GGAGCGCATC
AACGACCGCC TGATCGCCTG GACCGACGGC GACGCACTCT TCCGCCTGCC GGCGCCGAAG
GATGAGCCAC TGAGCATTTC AGTGACGCTG GCATCCGGCG CGCGCCCGAC GGCGTTGACC
GGCGAGACCT GCCTGGCGCT CGCTGCTGAA CCCGGCTTCT CCGTCGAAGA GGCAGAACAG
GCAGTATTCA CCACACCGGT ATGCGTTACC CCCGGCACCG AACCAACCAC CGTCACGCTG
GCGATTGATC CTCGCCAGAT GCCCTCCTCA CCAACCGGGC ATCTCCTCCT GCGCGTGCGC
AGCCCTGCCT TCATACCCGC CCGCGACGAT CCCGCCGGCC ACGATCCGCG CCGCCTGGGA
GTGCAGATTG TGGGGTTAGG GGTTCGTCGG GCGGCGCCCC CAACGCAGGC AGAGACCGTT
CCGCCACCGA CGCGCCAGCG TAGCACGCCG TCGTATGGTC AAGACCTCAA GGGTCGGGGA
CGCCCTTCAT CCCTGCTCAC AGACGACGTT CAACCCTCGG TTCGCTTGTT TTCATGCAAG
GCTCCCTGA
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| Protein sequence | MLCTVFPCTC GEYPTSIAAG SQFSVLGSQF LVTTIAPATL TLIILALILT GALIARALPV
AWRSSDPIER WFEYALIGAL LNGWLAFTLA QIGIFSAPLH GAVVAVLCII AALIRRASGS
QPATPDVQPS APGVPPAAPD VPPSTFNVPP ATPDGPPSTF NVPPATPDVP PATPDVPPAT
PDVPPATPDV PPSTFNVPPS TSDVPPATPD VPPSTFNLQP STFNLPRPTF NLQRPTFNLL
LSAILLLFVF LVTPPFETII GVRDAGVYAN AGFIMVRTGS LTFTDPLVAQ IAADQQSPDP
SLADAARQAE TNVLGVQNAQ RFIATRLRAA GFFIDQGDLA RGRVVPQGLH LFSAWIGLLA
AFFGMHGGLL APAVTGLLGV WSVALLGRRI AGPWVGLLAA LFLALSAVQV WFSRYSTAET
TAQFLIFAGL YAFARAFGSS TFNVQRSTPN LQPSTLNVER STPNVPLSAS NVQRSTFNVQ
PSTFNVQPST FNVPPSTNVQ PSTFNVPPST NVQPSTFNLQ PSTFNLQPST FHALLAGLAF
GQLALTRIEF FLVTGPLALY LIFIWLARRW TLPHTALLAG AGVMLLHAGL QIVFLARAYF
FDTLFARLQD FALTAALALP FLTPTLRQVY LLRPCSRLTM QPCPPIAGMP PTADAPLNWA
RIGTELFVVI LIIIALIVVR RLSLVAHFVS LLARLSHPLR LIAAVVVIVL GGYTYLIRPQ
ILSPATIAAL PACLTPAQLT SPQGACLTLQ GYVGAPIATP AYVDPLAGWI DHLIGMARGR
SNPPREACIA LRRETLPPSA DGRTMPEVLR DGLIREADVA PEILADLRAC DRYVLRDLFG
VAQANLVRLG WYLSPLGIAL ALAGLALMVY RINATSWLFL VIAAVASVVF LRLTYGASDQ
HYIYIMRRYV PHVYPAFAIG IAYAIAHLTL DLRLFADMLR SIARKAHRNA STGLQRPTTF
NVQGSIAFNV QGSMFRVPPS TPNLQPSTFN PQPSTPNLQP STPNLQPPTF NLRVLLTLAL
VLFLVVTGRP IYRHTEYAGA ITQIGAMAAQ LDPGAIVLMR GGAPSYAQAR DIPDLLATPL
TFGFGVDAFA LKSRDPGRYA PQLARYIRRW HDQGRPVYLA VSASGALTLP GWRLEPVGRF
LLDLPEYEQP TDHKPSAVQR FTLDFALYRL TPGAAGETPP VILPDDYAYQ VRGVYRAERI
NDRLIAWTDG DALFRLPAPK DEPLSISVTL ASGARPTALT GETCLALAAE PGFSVEEAEQ
AVFTTPVCVT PGTEPTTVTL AIDPRQMPSS PTGHLLLRVR SPAFIPARDD PAGHDPRRLG
VQIVGLGVRR AAPPTQAETV PPPTRQRSTP SYGQDLKGRG RPSSLLTDDV QPSVRLFSCK
AP
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