Gene RoseRS_1262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1262 
Symbol 
ID5208214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1550032 
End bp1550649 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content62% 
IMG OID640594878 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001275617 
Protein GI148655412 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000121828 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGTTGC GCGGTCCACG AGTGCTCATT CGTCCGTGGG AGAGTCATGA TGATGATGTG 
GCGGATACCT GGCCGCCCTA CAATGATCCC TTCGATCCCT TGTGGAACCT GCCGCGTCCG
TCGTCGTTCG GCGGCAGTGT ATGGCATACA TTTCTCGAAA ATGGCGCCCG ACGCCAGAGT
TGGGCGGTCG AGGATGCGGG TGGCGCTCTG ATCGGGCGCA TCTCGCTCCG CGAAATCGAC
CGGCAACGCA GGCAGGCGCG GCTCGGCGTG ACGTTTGCCG CACCGTATGT TGGCCGTGGC
CTGGGCACGG AAGCGCTCAC ATTGTTTCTC GACTACTACT TCGGTGCGCT CGACTATCGC
CTGCTGGTGC TTGACGTCGC CGCACCGAAC GTCCGTGCAG TGCGCTGCTA TACCCGCCTC
GGCTTTCGGT ATGTCGAAAG CGACTGGCGC AACGTGGGCG TTCTCTTTGA TCGACGAGTG
CTCGATCAGC CGATGTATGC GCCGCTGCGT CGCCATTTCC GCGACGACAT GCGCGGTCTG
AAGGTCGAGT TCTTCGAAAT GCGCCTCTGT CGCGAGGAGT GGATCCAGCG TCGCGCACCG
GTCGGGCTGC AGGGGTGA
 
Protein sequence
MKLRGPRVLI RPWESHDDDV ADTWPPYNDP FDPLWNLPRP SSFGGSVWHT FLENGARRQS 
WAVEDAGGAL IGRISLREID RQRRQARLGV TFAAPYVGRG LGTEALTLFL DYYFGALDYR
LLVLDVAAPN VRAVRCYTRL GFRYVESDWR NVGVLFDRRV LDQPMYAPLR RHFRDDMRGL
KVEFFEMRLC REEWIQRRAP VGLQG