| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1257 |
|---|
| Symbol | |
|---|
| ID | 5208209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1544234 |
|---|
| End bp | 1545049 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640594873 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001275612 |
|---|
| Protein GI | 148655407 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0480594 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000898687 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGC CACATATCGA ACAGGAACCA GCCCATCTTG AGATCGAGCG CCTGACCGTC
GCCTATGGGC GGCGGCGGGT GCTCGATGAT ATTTCGTTTC GTGTGGAATA CGGCGAACGA
GTGGTGCTGG TGGGACCAAA CGGCGCTGGC AAGTCGACTC TGTTCAAGGC GCTGGTCGGT
CTGGTGAAGC CACAGAGCGG CACGATCCGC ATTCACGGAC TGCCGCCTGG TGCGCATACC
GACTGTGTAG CCTACGTGCC GCAGCGTGAG GATGTCGACT GGCGCTTTCC GGTGACTGTC
GCCGATGTGG TGATGATGGG ACGGTTTGGA CGGCTCGGCT GGTTGAGACG CCCAACGCGC
GCCGACCACG CGGCTGTTGA ACGTGGGATG GAGTTGATGG GTGTGGCTCA CCTGGCGCGT
CGTCCTATCG GAGAATTGTC CGGCGGTCAG CAGCAGCGTG TCTTTCTGGC GCGCGCGCTG
GCGCAGGAGC CGCACATCCT CCTGCTCGAT GAACCGTTCA CCGGCGTCGA TGCAGCAACC
CAGGAAGCAA CCCTCAGTGT GCTCGACGCC CTCAGCGATC AAAAGGTGAC GATTATCCTC
TCCACGCACG ACCTTGGTCT TGCAGCGGCG CGCTTTGAGC GCGTGTTGCT GATCAACCGG
CGCCTGATCG GTGATGGACC TCCAGTCCGG GTCTTGAGTC GCGGTCCGCT GGCTGAGGCG
TTTGGCGGAC AGGTGTTGAC ACTGCCCGAT GGCTCGGTGC TGGTCGATCA GTGCGCCTGT
CATCAATCTG AACCAGAAAG CATTGTGGTG AAATGA
|
|---|
| Protein sequence | MNTPHIEQEP AHLEIERLTV AYGRRRVLDD ISFRVEYGER VVLVGPNGAG KSTLFKALVG
LVKPQSGTIR IHGLPPGAHT DCVAYVPQRE DVDWRFPVTV ADVVMMGRFG RLGWLRRPTR
ADHAAVERGM ELMGVAHLAR RPIGELSGGQ QQRVFLARAL AQEPHILLLD EPFTGVDAAT
QEATLSVLDA LSDQKVTIIL STHDLGLAAA RFERVLLINR RLIGDGPPVR VLSRGPLAEA
FGGQVLTLPD GSVLVDQCAC HQSEPESIVV K
|
|---|
| |