| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1255 |
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| Symbol | |
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| ID | 5208207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1541491 |
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| End bp | 1543293 |
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| Gene Length | 1803 bp |
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| Protein Length | 600 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640594871 |
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| Product | oligoendopeptidase F |
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| Protein accession | YP_001275610 |
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| Protein GI | 148655405 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR00181] oligoendopeptidase F |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0012526 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCGAAA CGCAAAAAGT GCCGCGCCGT GATGAGATTC CTGAGCATTA TCGCTGGGAT
CTGACGACGA TATATGTCGA TGATGCCGCC TGGGAGCAGG ATGTCGCTAC GATCGAGCAG
ATGCTGAGCG ATGTTGCCGC AGTGCAAGGA CGCGTCGCTG GCAGCCCTGA CGACCTGCTG
GCGGCATTGC GACTACGCGA TCAGGTATCG ATGCGTCTCT GGCAGATCTA CGTCTACGCC
AACCGTCGCT TTGATAGCGA CACAACCGAC CCGGTCGGGC AGGCGCTTGC CGAACGCGCC
GGAACGCTGG CGGCGAAGGT CGGCGCGGCG CTGGCGTTTA TCGAACCGGA GATCCTGGCG
GCGCCGGAGG ATCAGATCCG CGCCTGGATC CGGGAGTACC CCGATCTGGC AGTGTATGAG
TACGCACTGG ATCAGTTGTT GCGCCAGCGC GCTCACGTGC GCTCTGCCGA GGTCGAAGCG
ATCCTGGCGC AGTTCAGCGA TATTACACGC GCGCCGGGCG AGATTTTTGA AGTCTTGACC
AATGCCGATC TGCATTTTCC ATCAATTGAG GATGAGCAGG GGCAGCCGGT GCAACTGTCG
CACGGGCGTT TCCTGCGCTT CCTGCGCAGT CCTGATCGCA GGGTGCGCCG CGATGCGTTC
GTCGGGTACT ATAGCGCCTT CCAGGGGATA CGCAATACGC TGGGGGCGTC GCTTGCCGCG
CAGGTGCGCA CCCACGTGCT GAATGCGAAG GTTCGCAATT ATGCGTCATC ACTGGAGGCG
GCGCTGACGC CGAACGACAT TCCGGTGGAG GTTTACCATA ACCTGATTGC GACGGTCAAC
GCCAGCCTGC CCCGTCTCCA CCGCTATTTC CAGGCGCGCC GGAAGATCAT GGGGCTGGAT
GAACTGCACT TCTACGATCT GTACGCCCCG CTCGTTCCAG AAGCAGATGT TGCGGTTCCG
TATGAAGAAG CGGAACGCAT GGTGCGTGCG GCATTCGAGC CGCTCGGCGA TGAGTATGGC
GCTGCCGTTG CGCAGGCGTT CCGCAGTCGC TGGATCGATG TCTACGAGAA TATCGGCAAG
CGCAGCGGCG CATACAGCGA CGGTTCGTAC ACCACTGCGC CGTTCATGCT GCTGAATTAC
CAGGAACGCC TGAACGACGT GTTTACGCTG GCGCACGAAC TCGGTCATGC AATGCACTCG
TACTTCACGC GCAAGACGCA GCCCTACATT TATGGCGACT ACACCATCTT TGTCGCTGAA
GTCGCTTCCA CGCTGAACGA GGCGCTGTTG ACCGATCACC TGTTGCGAAC GCGCGATGAC
CCGATCCTGC GCCGCTATCT GATTGTCGAG CAACTGGAAG ATATTCGCAC CACACTCTTC
CGACAGACCA TGTTCGCCGA GTTTGAACTG GAAATCCATC GTCGGGCGGA GACAGGAGAG
CCGCTGACGA CCGAACTGTT CAGCACGATC TACCGCGATC TGGTGGCGCG TTACCACGGG
TCGGAAGTGG CGCTCGACGA GCAGATCGCG CTGGAATGGG CGCGTATTCC GCATTTCTAC
TACAATTTTT ATGTCTACCA GTATGCAACC GGGCTTTCGG CGGCGCTGGC GCTGCACAAA
CGGATCGTTC AGGAAGGAAG TCCAGCTATC GAGCGGTATC TGCATTTCCT GCGCAGCGGA
TCGTCGCGCC CTTCGATTGA ACTGTTGCGC GATGCCGGGG TTGATATGCT CTCGCCAGCG
CCGATCCAGG CGGCGATGGA TCACTTCAGC GCATTGCTCG ATGAACTGGA GCGGATGACA
TAG
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| Protein sequence | MTETQKVPRR DEIPEHYRWD LTTIYVDDAA WEQDVATIEQ MLSDVAAVQG RVAGSPDDLL
AALRLRDQVS MRLWQIYVYA NRRFDSDTTD PVGQALAERA GTLAAKVGAA LAFIEPEILA
APEDQIRAWI REYPDLAVYE YALDQLLRQR AHVRSAEVEA ILAQFSDITR APGEIFEVLT
NADLHFPSIE DEQGQPVQLS HGRFLRFLRS PDRRVRRDAF VGYYSAFQGI RNTLGASLAA
QVRTHVLNAK VRNYASSLEA ALTPNDIPVE VYHNLIATVN ASLPRLHRYF QARRKIMGLD
ELHFYDLYAP LVPEADVAVP YEEAERMVRA AFEPLGDEYG AAVAQAFRSR WIDVYENIGK
RSGAYSDGSY TTAPFMLLNY QERLNDVFTL AHELGHAMHS YFTRKTQPYI YGDYTIFVAE
VASTLNEALL TDHLLRTRDD PILRRYLIVE QLEDIRTTLF RQTMFAEFEL EIHRRAETGE
PLTTELFSTI YRDLVARYHG SEVALDEQIA LEWARIPHFY YNFYVYQYAT GLSAALALHK
RIVQEGSPAI ERYLHFLRSG SSRPSIELLR DAGVDMLSPA PIQAAMDHFS ALLDELERMT
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