| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1254 |
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| Symbol | |
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| ID | 5208206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1539973 |
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| End bp | 1541391 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640594870 |
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| Product | amidase |
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| Protein accession | YP_001275609 |
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| Protein GI | 148655404 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0156398 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAATA CCGCCGAACT CTGTTTCCTC ACTGCCATCG AGCTTACACA GCGCATTCGC
GCCCGCAGTA TATCGTGCGT CGAGGTAATG GAGGCGCACC TGCGCCAGAT CGAACGAGTC
AACCCGCAGG TCAACGCAAT TGTTACACTG GCGCCCGAAC AGGCGCTGGC GCAGGCGCGC
GCAGCTGATG CTGCACTACG CCGCAGCGAT GCCGTCGGAC CCCTGCACGG ATTGCCGGTG
GCGCACAAAG ACCTGGTGCA GACGAAGGGG ATGCGCACAA CGTTTGGCTC TCCGATCTAC
GCCGACTTCG TTCCCGACGT CGATGACCTG ATCGTAACCC GCATACGCAA CGCCGGGGCG
ATCTTGATCG GCAAGACCAA CACCCCTGAG TTTGGCGCCG GCTCTCAGAC GTTCAACCCG
GTCTTTGGCG CAACCCGCAA CCCCTACGAC CTCTCGAAAA CCTGCGGCGG CAGCAGTGGC
GGCGCAGCGG TAGCCCTGGC GTGCGGCATG CTCCCGATTG CCGATGGGAG TGATACTGGC
GGATCGCTGC GCAATCCTGC CAGCTTCTGC AATGTGGTCG GCTTTCGTCC GTCGCCGGGG
CGCGTACCGT CCTGCTCGGA TCGCGCCGCC TGGCAGACCC TCAGCGTGCC CGGTCCGATG
GCGCGCACGG TGGCGGATGC TGCGCTGCTG CTCAGCGCCA TGGCAGGACC GCATCCCTGC
TCACCGATCG CTCTCCAGAA ACCGGGGGCG CACTTTCGTC AACCGCTCGA CCGTGATTTC
CACGGTGTGC GCGTGGCGTG GAGCCGCACC GCCAGCGGAT TGCCCATCGA TCCAGAGGTC
ACCGCTGTGC TTGAACAGGC GCGCCCGGTG CTGGAAGCGA TCGGCTGCAT CGTCGAAGAG
ACTGAACCGG ATTTCACCGG CGCGGACGAA GCGTTCAAGG TGTGGCGCGC CTGGGGATAC
GAACAAAAAC TGGGCGAGCT TGCCGATACG CATCGTGATC GTCTCAAAGA GACGATTCTC
TGGGAAATCG AACAGGGGCG TGCGCTGACA GGACCGCAGA TCGGGCGCGC CGAACGGCTG
CGCACGGCGC TGTACCACCG GATGCGCAGG TTCATGCAAA CGTATGAGTT CCTGGCGCTG
CCGGTCGTCC AGGTTCCGCC TTTCCCCATT GAACAACCGT ATGTGACGGA GATCAACGGC
GTCCCGATGG ACACGTACAT CGACTGGATG CGATCGTGTT ACTATATTTC AATCACCGGT
TTCCCGGCGA TTTCCGTTCC CGCAGGGTTC ACGCGCGACG GGTTGCCGGT CGGGTTGCAA
CTGGTCGGGC GTCACCACAA CGATTTCGGC GTGCTGCAAC TGGCGCACGC CTTCGAGCAG
GCGACCGGGC ACTGGCGCCG ACGACCGCCG ATTGTATGA
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| Protein sequence | MDNTAELCFL TAIELTQRIR ARSISCVEVM EAHLRQIERV NPQVNAIVTL APEQALAQAR
AADAALRRSD AVGPLHGLPV AHKDLVQTKG MRTTFGSPIY ADFVPDVDDL IVTRIRNAGA
ILIGKTNTPE FGAGSQTFNP VFGATRNPYD LSKTCGGSSG GAAVALACGM LPIADGSDTG
GSLRNPASFC NVVGFRPSPG RVPSCSDRAA WQTLSVPGPM ARTVADAALL LSAMAGPHPC
SPIALQKPGA HFRQPLDRDF HGVRVAWSRT ASGLPIDPEV TAVLEQARPV LEAIGCIVEE
TEPDFTGADE AFKVWRAWGY EQKLGELADT HRDRLKETIL WEIEQGRALT GPQIGRAERL
RTALYHRMRR FMQTYEFLAL PVVQVPPFPI EQPYVTEING VPMDTYIDWM RSCYYISITG
FPAISVPAGF TRDGLPVGLQ LVGRHHNDFG VLQLAHAFEQ ATGHWRRRPP IV
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