| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1250 |
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| Symbol | |
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| ID | 5208202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1534644 |
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| End bp | 1536866 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640594866 |
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| Product | cell surface receptor IPT/TIG domain-containing protein |
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| Protein accession | YP_001275605 |
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| Protein GI | 148655400 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.816915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.345768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCTT CCATTTCTCT CAATCTCTTC ATCCGCGCGC TGACAATTTT GAGTCTTTGT
GCAGGGTTGA TCGGCGTCGC CGGTCTCACA CCCCGCTCAG CGCAGGCCAA TGTCCAGCCA
TCGTGCTCCA CCACGCCGCT GTTCACCAAC GGCACATTCA TCACTGGGGA AAACAACGGA
GCAGGAGGCG CCGATACCAG TTCGCCTCCA TCGGATCCAT TTCACCGAGG ACTTGGCTTT
CTGGTTGATC CGACGCAGCT ACAGACCTCT TTTCCCTCTG GCTCTCCCAG GCGTGCTCGC
CTGGCAGACG ATTTCACCGT GACCAGTAAC GGATGGCGTC CTTCAGCGCT CACTTTTTAT
GCCTACCAGA CCTACGCCAT CTCTTCGTCA TCCAGCATCA CCGGTGTGAT AGATCTGCGC
CTGTGGAACG GCACACCAGG CGAAGGCGGT GAGGTCATTG CCGGACCGGT CGATGCCACA
ATTACGAACA ACCAGTGGAC CGGCGTCTAC CGCGCGTATT CCAACGATTT AGGAAACACC
GATCGCCCGA TCATGGCGGT AACGGTTAAC TGGCCCTTTA GCATCACCAC ACTGCTGCCT
GGCACCTACT GGATCGAGTG GGGTATGGCG GGTAGCCCCA GCTTTACCGG TCCCTGGGTT
CCAGCAGTCA GTTTCGCCAC CAGCAATAAT GCGCGCCAGC TTGACCTGAC CAGTGGCGAG
CCGGGAACGT GGGCGCCGCG AGGTGATTAT GATGTGAGTG ACCGTATCGC CGAGTTTCCA
TTCGTGATTT GTGGCGACAC CATTCCCACG CCTCAGATCA CGAGCCTGAG TCCAGATCAG
GCAGTCGCTG GCGGTGCAGA GTTTACGCTG ACCGTCAACG GCAGCGGTTT TATCGACGGA
ACCGGATCGG ATCGCTCGGT TGTCCACTGG AACGGAAGTC CCATCACAGC GACCAACTTC
ATCTCCAGTA CTCAACTGAC CGCCACCATT CCCGCCAGCA ATATTGCGAC TGCCGGGACA
GCGAATGTCA CCGTTGTCAA TCCGGGGAAT CTCACCTCCA ACACGGCACC CTTCACCATC
ACGAACCCCT TGCCGACGAT CAGCAGCATC AGTCCAGCGA CAACGGTCGC CGGAAGCGGC
GGGTTCACCC TCACCATCAC CGGTACGAAC TTCGTCACCA ACTCGGTGGT GCGCTGGAAT
GGGAGCGACC GCCTGACGAC CTTCGTCTCC AGCACCCGGT TGGAAGCCGC CATCTCCGCC
AGCGACGTTG CGACCGCCGG GACGGCGAAC GTGACGGTCT TCAACCCCAC CCCCGGCGGC
GGCGAGTCGG GCGCGGTGAC GTTCACCATC AATAATCCGG CGCCGACGAT CAGCAGCATC
AGTCCAGCGA CGGCGGTCGC CGGGAACGGC GGCTTCACCC TCACCATCAC CGGCACGAAC
TTCGTCACCA ACTCGGTGGT GCGCTGGAAC GGAAGTAATC GCACCACGAC CTTCGTCTCC
AGCACCCAAC TGACCGCCGC CATCCCCGCC AGCGATGTTG CGACCGCCGG GACGGCGAAC
GTGACGGTCT TCAACCCTGC TCCCGGCGGC GGTACGTCCA ACACGGCAAC TTTCACCATC
ACGAATCCAT CGCCGACGAT CACGACTATC AGTCCAGCGA CAACGGTCGC CGGGAGCGGC
GGGTTCACCC TCACCATCAC CGGCACGAAC TTCGTCACCG GCGCGGTGGT GCGCTGGAAC
GGGAACAACC GCACCACGGG GTTCGTGTCC AGCACAGTGC TGACCGCCAC CATCCCCGCC
AGCGACGTTG CGACCGCCGG GACGGCGAAT GTGACGGTCT TCAACCCCGC CCCCGGCGGC
GGCGAGTCGG GCGCGGCGAC GTTCACCATC ACTAACCCAT CGCCGACGAT CAGCAGCATC
AGTCCAGCGA CGGCGGTCGC CGGGAGCGGC GGCTTCACCC TCACCATCAC CGGCACGAAC
TTCGTCAACG GCGCGGTGGT GCGCTGGAAC GGAAGTCCTC GCCCAACGAC CTTCGTCTCC
AGCACCCAAC TGACCGCCGC CATCCCCGCC AGCGACATTG CGACCGCCGG GACGGCGAAT
GTGACGGTTT TCAACCCCGC CCCCGGCGGC GGCGAGTCGG GCGCGGTGAC GTTCACGATT
CAGGACAATA CCGTTGGATC ACCACAGCAA TACCGGGTTA TGCTGCCGCT CATTACACGA
TAG
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| Protein sequence | MKPSISLNLF IRALTILSLC AGLIGVAGLT PRSAQANVQP SCSTTPLFTN GTFITGENNG
AGGADTSSPP SDPFHRGLGF LVDPTQLQTS FPSGSPRRAR LADDFTVTSN GWRPSALTFY
AYQTYAISSS SSITGVIDLR LWNGTPGEGG EVIAGPVDAT ITNNQWTGVY RAYSNDLGNT
DRPIMAVTVN WPFSITTLLP GTYWIEWGMA GSPSFTGPWV PAVSFATSNN ARQLDLTSGE
PGTWAPRGDY DVSDRIAEFP FVICGDTIPT PQITSLSPDQ AVAGGAEFTL TVNGSGFIDG
TGSDRSVVHW NGSPITATNF ISSTQLTATI PASNIATAGT ANVTVVNPGN LTSNTAPFTI
TNPLPTISSI SPATTVAGSG GFTLTITGTN FVTNSVVRWN GSDRLTTFVS STRLEAAISA
SDVATAGTAN VTVFNPTPGG GESGAVTFTI NNPAPTISSI SPATAVAGNG GFTLTITGTN
FVTNSVVRWN GSNRTTTFVS STQLTAAIPA SDVATAGTAN VTVFNPAPGG GTSNTATFTI
TNPSPTITTI SPATTVAGSG GFTLTITGTN FVTGAVVRWN GNNRTTGFVS STVLTATIPA
SDVATAGTAN VTVFNPAPGG GESGAATFTI TNPSPTISSI SPATAVAGSG GFTLTITGTN
FVNGAVVRWN GSPRPTTFVS STQLTAAIPA SDIATAGTAN VTVFNPAPGG GESGAVTFTI
QDNTVGSPQQ YRVMLPLITR
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