Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1240 |
Symbol | |
ID | 5208192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1520206 |
End bp | 1522812 |
Gene Length | 2607 bp |
Protein Length | 868 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640594856 |
Product | primosomal protein N' |
Protein accession | YP_001275595 |
Protein GI | 148655390 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTTACA CTGGTGGTAT GACTGCCGAA CTCCTCGCCG ATGTCGCTCT GAGCGCCAAT GCGGTCTTCA CCTATCGCGT GCCGCCGTCG TTGCGCCCCC TGCTGCGCGT CGGTCATCTG GTGTGGGCGC CGCTGCGACA GCGGCATGTC CAGGGGGTGG TGCTCGATCT GTATGCGTGG GGCGGTAGTC CGCACGATCC GGCGGTTGCG CTCAGCCCGC CCGCGCTGCG CGCCGATCCC GCCGATTGGT TCGACCCGCA GACCCCGACC CTGCGCGATG TGATCGACAT TGCCGACCCG GATATTGCCC TGACGCCAGC GCAGATTCGC CTGGCGCACT GGATCGCCGA TTACTACCGG GTGTCGCTCT ATGAGGCGCT GACCCTTATG ACGCCGCCTG GCATTGCGCG TGAAGCTGAG ACTACATGGC GTGCGACGGT GGAGGGGCAC AGCGTGAACC CCGGCGCCCT GCCGCCGGGT GAACGTGATG TGCTCTACCT GCTGCGCCGC AGCGGTGAGA TGACCGAACG TGAGTTGCGG AAGCGTCTGC GCGGCAGCGA CGCCGAACTT CAGGCGATCT ACACCGCCCT GCGTGAGCGC GGGTTGATTG CGCGCGGCGC CACCCTCGCC CGCGCGCGCG CGCGTCCCCG CACCGAACGC CTGGTGCGCC TGGCGCTTCC CCCAGACGAA GCACATACGG CGCTGGAGGG TCTCGCGCGC GCGCCGCGAC AGCGCGACCT GCTGGCGTAC CTGATCGATC ATCCAGACCC GATCCCGGTT CCCGATCTGC TCACAGCCGC CAATGCCGAC TCTGGCACGC TGCGCGCGCT GGAGCGCCGG GGCCTGATCG ATATCATCGC CCGCGACGTG TGGCGCGATC CGCTTGCGCT GCTCGATGTT CCGCCCGATA CGCCGCCGAC GCTGAGCCTG GCGCAGCAGA AGGCATGGGA CGCCATCGCC GGGGCGCTCG ACTGGTGCAC CAATGCAACG GAAGATCGCG CCGCTCCAGC GCAGACGCAC TTCCTGCTGC ACGGCGTCAC CGGCAGCGGC AAAACGGAAC TCTACCTGCG CGCCATTGCC CGCGCGCTGC GCCTGGGACG ACAGGCGCTG GTGCTGACGC CTGAGATCGC CCTGACGACC CAGATGGTTC GGCGCTTCGC TGCGCGCTTC CCCGGTCAAC TGGCAGTGTT GCACAGTGAA CTGTCGATCG GCGAACGCTA CGACCAGTGG CGGCGACTGC GCCGCGGCGA CGCCGGCATC GCCATCGGGT CGCGCTCCGC AGTCTTCGCG CCGCTTCCCA ACCTGGGGTT GATCATCGTC GATGAGGAGC ACGAACCATC GTACAAGCAC GATGCCGCAC CGCGCTACCA CGCCCGTGAT GTTGCGCAGC GCCTGGCAAC GATCACCGGC AGCGTCCTGA TCCTGGGCAG CGCGACGCCA TCGGTCGAAA GTTATGCCGC CGCGCGCGCC GGGCATCTGC GTCTGCTGGA ATTGCCGGAG CGCATCACGA CGGCAACCGG ACCCGATGGC TTACCGCATA TCCGCACACT CCCCCTGCCG CACGTGACGG TTGTCGATAT GCGACGCGAA CTGGCAGAGA ACAATCGCTC GATCTTCAGC CGGGCGTTGC AGGCGGCGCT GGCGGAAACG CTGAAGCGCG GCGATCAGGC GATCCTGTTC CTCAACCGGC GTGGTTCGGC GTCGTTCTTT CTGTGCCGCG ATTGTGGTCA TGCCATGACC TGCCCGTCCT GTTCCTCACC GCTCACCCTG CACCAGGAGG CGGGCGATGG ACAGGCCGCT TCGTCTGGCG GGATGCTCAT TTGCCACACC TGCAACCACC GTGAACTGCC GCCAGCGCTC TGCCCGCACT GCTGGAGTGC GCGGATCAAA TCGTTCGGCG TCGGCACGCA ACGGGTCGTG GATGAAATCA CGACGCTCTT CCCCAGAACG CGCACCCTGC GCTGGGACCG TGACAGCGTG ACGCGCAAAG GAGACCACGA CCGCCTGCTG GATCGCTTCC TGCGCCACGA GGCGGATGTG CTGGTCGGCA CGCAGATGAT CGCCAAAGGG CTGGACCTGC CGATGGTGAG GATGGTCGGC GTGGTAGCTG CCGATACCGG CCTGTACCTG CCCGATTTTC GAGCCGGTGA ACGCGCCTTT CAACTGCTGA CGCAGGTGGC CGGTCGGGCG GGGCGCCGCG AAGCGGGGGC ACATGTGATC ATTCAGACCT ATGCGCCCGA ACACTACGCC ATTCGCGCTG CGCAGGAGCA CGATTACCAC GCTTTCTATG AGCAAGAGAT CGCCTTCCGC CGCCAGACCG GCTATCCCCC CTTCGCGCGC CTGGTGCGGT TCGTGTATGG CGCTGGCAGC GACGCCCGCG CGCGACGCGC TGCCGAGGCG CTGGCAAACG ACATTCGCTC CCTCGCCGTT CGCCACCTCG CCGATGATTG GAGCCTGGTC GGACCGGCGC CGGCCTTCTT CCGCGTGCAG CGCAACCGTT ACCGCTGGCA CCTCATTCTG CGCGCCCTCG ACCCGACGCC GCTGATCCAG GCGCTGCGCA TCCCGCCGGG ATGGATCGTC GATATCGATC CGGTGCATGT GTTGTAA
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Protein sequence | MCYTGGMTAE LLADVALSAN AVFTYRVPPS LRPLLRVGHL VWAPLRQRHV QGVVLDLYAW GGSPHDPAVA LSPPALRADP ADWFDPQTPT LRDVIDIADP DIALTPAQIR LAHWIADYYR VSLYEALTLM TPPGIAREAE TTWRATVEGH SVNPGALPPG ERDVLYLLRR SGEMTERELR KRLRGSDAEL QAIYTALRER GLIARGATLA RARARPRTER LVRLALPPDE AHTALEGLAR APRQRDLLAY LIDHPDPIPV PDLLTAANAD SGTLRALERR GLIDIIARDV WRDPLALLDV PPDTPPTLSL AQQKAWDAIA GALDWCTNAT EDRAAPAQTH FLLHGVTGSG KTELYLRAIA RALRLGRQAL VLTPEIALTT QMVRRFAARF PGQLAVLHSE LSIGERYDQW RRLRRGDAGI AIGSRSAVFA PLPNLGLIIV DEEHEPSYKH DAAPRYHARD VAQRLATITG SVLILGSATP SVESYAAARA GHLRLLELPE RITTATGPDG LPHIRTLPLP HVTVVDMRRE LAENNRSIFS RALQAALAET LKRGDQAILF LNRRGSASFF LCRDCGHAMT CPSCSSPLTL HQEAGDGQAA SSGGMLICHT CNHRELPPAL CPHCWSARIK SFGVGTQRVV DEITTLFPRT RTLRWDRDSV TRKGDHDRLL DRFLRHEADV LVGTQMIAKG LDLPMVRMVG VVAADTGLYL PDFRAGERAF QLLTQVAGRA GRREAGAHVI IQTYAPEHYA IRAAQEHDYH AFYEQEIAFR RQTGYPPFAR LVRFVYGAGS DARARRAAEA LANDIRSLAV RHLADDWSLV GPAPAFFRVQ RNRYRWHLIL RALDPTPLIQ ALRIPPGWIV DIDPVHVL
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