Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1213 |
Symbol | |
ID | 5208165 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1489161 |
End bp | 1492739 |
Gene Length | 3579 bp |
Protein Length | 1192 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640594831 |
Product | pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein |
Protein accession | YP_001275570 |
Protein GI | 148655365 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGA GTTGGGTCAC GCTGGAGGGC AATGAGGCTG CCGCCAGCAT TGCGTACCGC CTGAGTGAAG TCATTGCTAT TTATCCGATC ACACCTTCCA CGCCCATGGG TGAACTGGCG GATGCCTGGG CTGCCGCCGG AAAGCCAAAT TTGTGGGGCA CGACGCCCCT GGTCATCGAG ATGCAGTCGG AAGGCGGCGC GGCCGGCGCC TGTCATGGAG CATTGCAACG CGGCGCGCTG ACGACGACCT TCACCGCATC GCAGGGATTG CTGTTAATGA TCCCGAACAT GTACAAAATC GCCGGTGAAC TGACCTCAAC CGTCTTTCAC ATTGCGGCGC GCTCGATTGC GACCCATGCG CTGTCGATCT TCGGCGATCA TCAGGATGTG ATGGCGACAC GTCAGACGGG ATGGGCGCTG CTGGCCTCCT CGTCGGTGCA GGAAGCGCAC GATCTGGCGC TGGTGGCGCA CGCGGCGACG CTCAAGGCGC GCGTGCCATT CCTCCACTTC TTCGACGGGT TCCGCACGTC GCACGAGATC AATAAGATCG AGCAACTGAC GGATGACGAC CTGCACGCAA TGATTGACCC GGCGCTGATT GCGGCGCATC GTATGCGCGC CCTTACCCCT GATCAGCCGG TCATTCGCGG CACGGCGCAG AATCCCGATG TGTACTTCCA GGCGCGTGAG ACGGTCAACC CCTTCTATGC AGCAACGCCG GGCATCGTTC AGGAAACGAT GGATCGGTTC GCACAGTTGA CGGGACGCGC CTATCACCTG TTCGACTACA CAGGCGCGCC GGATGCCGAG CGCGTGATTG TGATCATGGG TTCTGGTGCG GAAACTGCGC GCGAGACGGC GACGTTTCTG GCGGAACGCG GCGAGAAGGT CGGGGTTGTC TCCGTGCGTC TCTATCGTCC GTTTTCGGTG GCGCACTTCG TGGCGGCGTT GCCGACGACG GTGCAGCGCA TTGCGGTGCT TGACCGCACG AAGGAGCCGG GCAGCAGCGG CGAGCCGCTC TACCTCGATG TTGTAACGGC AATGGCGGAG AGTGGTCGTC ATCTGCCGGT AATCGGCGGC AGGTATGGTC TGGCATCCAA GGAGTTCACT CCCGCCATGG TGAAGGCGGT GTTCGATGAA CTGGCGAAGG ATCAGCCGAA GAACCATTTC ACGGTCGGCA TCATCGACGA TGTGAGCCAC ACCAGCCTGG ATGTCGATCA GTCGTTCTCG ATTGAGTCGC CGCGCACGGT GCGCTGTCTG TTCTACGGGT TGGGCGCTGA TGGCACGGTT GGCGCCAATA AGAACTCGAT CAAGATCATC GGCGAAGAAA CCAACAACTA CGCGCAGGGG TACTTCGTCT ACGACTCGAA GAAATCCGGT TCGATGACCG TGTCGCACCT GCGCTTCGGA CCCGATCCGA TCCGCGCGCC GTACCTGATC GAGCGGGCGA ATTTCGTCGC CTGCCATCAG TTCTCCTTCC TCGAACGCAT CGATGTGCTG AAAGCGGCTG AACCCGGCGC GGTCTTCCTG CTGAACAGCA TGTATGGACC GGACGAGGTC TGGTACCACC TGCCGCGCGA AGTGCAGGAC GACATTGTGC GCAAGAAGTT GAAGTTCTAT GTGATCGACG GTGACCGGGT GGCGAAAGAG AGCGGCATGG GGCGGCGCGT CAACACTGTG ATGCAAACGG CATTCTTCGC CATTTCGGGC GTGCTGCCGC GTGAGGACGC GATTGCCGAG ATCAAGCGCA GCATTAAGAA GACCTATGGC AAACGCGGTG AGGCGGTGGT GCAGCAGAAC TACCGCGCCG TCGATGCCGC GCTTGCACAC CTGTACCAGG TGGATGTTGA AAAATTCGCC GGGTTCCGGT CGCCGTTCAC CCGCCGACCG CCGGTGCCTG AACAGGCGCC AGAGTTCGTG AAAGAAGTGC TTGCTCCAAT GATCGCCTAT GAGGGCGACT CGCTGCCGGT GAGCAAACTG CCGGTCGATG GCTCCTTCCC CACCGGCACG GCGGCGTGGG AAAAGCGAAC AATCGCGCTG GAGGTGCCGG TCTGGGAACC CGACATCTGC ATCCAGTGCG GCAAATGCGC CTACGTCTGC CCGCACGCAG TCATCCGCAC GAAGGTGTAC GAACCGGCGC TGCTCGAAGG TGCTCCCGAA ACGTTCCTCA GCGCCGAAGC GCGCTTCAAG GAATTCCCCG GTTACAAATA CACCCTGGCG ATTTCGTCGG AAGACTGCAC CGGATGCGGG CTGTGCGTCG AGGTGTGTCC GGCGAAGGAC AAGCGACAGG TCGGGCGTAA GGCGATCAAC ATGAAACCGC TGGTCGAGGT GCGTGAGCGT GAGGTGCGCA ACTGGAATTT CTTCCTGAGC ATCCCTGATG TGCCGCGCAC ATCGTTGCAC GTCGGGTCAA TCAAGAACTC GCAGTTGCTT CAACCGTTGT TTGAGTTCTC CGGCGCGTGC GCAGGGTGCG GCGAGACGCC GTATATCAAA CTGCTGACGC AACTGTTCGG TGATCGCTTG CTGATAGCCA ATGCGACTGG TTGCTCGTCG ATCTACGGCG GCAACCTGCC GACGACGCCG TACACGAAGA ATGCCGAAGG GCGTGGTCCT ACATGGTGCA ACTCGCTCTT TGAGGACAAT GCTGAGTTTG GTCTTGGCAT GCGTCTGGCG CTCGACCAGC AGATCGAGCA CGTGCGCGAA CTGCTGCCGC TGTTTGCGCC GGTCGTCGGG CAGGACCTGG TCGATGCCCT GTTGAACGCC GATCAGAGCA CCGAGGCAGG CATTGCCGCG CAGCGTGAGC GGGTCGAATT GCTGAAACAG CGTCTCCATA CGCTGGATCG CAGCCAGTTC CCGGATGTTG TGGAGCGTGA GCACGAACTG CTCAGCCTGG CAGACGTCCT GGTGAAGAAG AGCGTCTGGA TCGTTGGCGG CGATGGTTGG GCGTATGACA TCGGCTACGG CGGACTCGAC CATGTGCTGG CGTCGGGGTA CAAGGTCAAT GTCCTGGTGC TTGACACTGA AGTGTACTCC AACACGGGCG GGCAGGCGTC GAAGTCCACC CCGATCGGCG CGGTGGCGAA GTTTGCCGCA AAGGGCAAAT CCTCGCCAAA GAAGGATCTC GGTCTGATCG CAATGGCATA CGGAAATATC TATGTGGCGC GGGTGGCAAT GGGCGCCGAT GACGTGCAGA CGCTGCGCGC CTTCATGGAG GCTGAGGCGT ATGATGGCCC ATCGCTGATC ATCGCCTATT CGCACTGCAT TGCTCATGGC ATCGATATGC GCAAGGGTCT GGATCAGCAG AAACTGGCGG TTCAGACCGG CTACTGGCCA CTGTACCGCT ACAATCCGAG TCTGGCAGCT GAAGGGAAGA ATCCGCTGAT TATCGACTCG AAAGATCCAT CGCTGCCGCT TGAGAAGTTC ATCTATAACG AGACTCGTTA TCGCATGCTG GTGCAGAGCG ATCCAGAGCG TGCTGAGATG CTTCTCCATC AGGCGGAGGC GTCGGTTCGC GCGCGCTGGC AGCACTATAA GGAGTTGGCG GCGCTCAGTG AGGTGAGAGC GGAGCGCGAC GGGCATTAG
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Protein sequence | MKRSWVTLEG NEAAASIAYR LSEVIAIYPI TPSTPMGELA DAWAAAGKPN LWGTTPLVIE MQSEGGAAGA CHGALQRGAL TTTFTASQGL LLMIPNMYKI AGELTSTVFH IAARSIATHA LSIFGDHQDV MATRQTGWAL LASSSVQEAH DLALVAHAAT LKARVPFLHF FDGFRTSHEI NKIEQLTDDD LHAMIDPALI AAHRMRALTP DQPVIRGTAQ NPDVYFQARE TVNPFYAATP GIVQETMDRF AQLTGRAYHL FDYTGAPDAE RVIVIMGSGA ETARETATFL AERGEKVGVV SVRLYRPFSV AHFVAALPTT VQRIAVLDRT KEPGSSGEPL YLDVVTAMAE SGRHLPVIGG RYGLASKEFT PAMVKAVFDE LAKDQPKNHF TVGIIDDVSH TSLDVDQSFS IESPRTVRCL FYGLGADGTV GANKNSIKII GEETNNYAQG YFVYDSKKSG SMTVSHLRFG PDPIRAPYLI ERANFVACHQ FSFLERIDVL KAAEPGAVFL LNSMYGPDEV WYHLPREVQD DIVRKKLKFY VIDGDRVAKE SGMGRRVNTV MQTAFFAISG VLPREDAIAE IKRSIKKTYG KRGEAVVQQN YRAVDAALAH LYQVDVEKFA GFRSPFTRRP PVPEQAPEFV KEVLAPMIAY EGDSLPVSKL PVDGSFPTGT AAWEKRTIAL EVPVWEPDIC IQCGKCAYVC PHAVIRTKVY EPALLEGAPE TFLSAEARFK EFPGYKYTLA ISSEDCTGCG LCVEVCPAKD KRQVGRKAIN MKPLVEVRER EVRNWNFFLS IPDVPRTSLH VGSIKNSQLL QPLFEFSGAC AGCGETPYIK LLTQLFGDRL LIANATGCSS IYGGNLPTTP YTKNAEGRGP TWCNSLFEDN AEFGLGMRLA LDQQIEHVRE LLPLFAPVVG QDLVDALLNA DQSTEAGIAA QRERVELLKQ RLHTLDRSQF PDVVEREHEL LSLADVLVKK SVWIVGGDGW AYDIGYGGLD HVLASGYKVN VLVLDTEVYS NTGGQASKST PIGAVAKFAA KGKSSPKKDL GLIAMAYGNI YVARVAMGAD DVQTLRAFME AEAYDGPSLI IAYSHCIAHG IDMRKGLDQQ KLAVQTGYWP LYRYNPSLAA EGKNPLIIDS KDPSLPLEKF IYNETRYRML VQSDPERAEM LLHQAEASVR ARWQHYKELA ALSEVRAERD GH
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