| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1207 |
|---|
| Symbol | |
|---|
| ID | 5208159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 1483121 |
|---|
| End bp | 1483711 |
|---|
| Gene Length | 591 bp |
|---|
| Protein Length | 196 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640594825 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001275564 |
|---|
| Protein GI | 148655359 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.469541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGCGA CCGCAATTCC CGGCTATACC TATGGAACGG ACCAGGTGGC GCATGCTCCC
CTGACCATGC AGGACCTGGA CCTCTTGAAG CAGGCAGTGT TGTTCGGACC GGAGGATGAG
CAGTACCTGC GGATGGCGGG CGAGGTGCTG GCGGATCAGA TCGATGATGT TCTCGATCTG
TGGTACGGTT TTGTCGGTTC ACATCCGCAC CTGGTGTACT ACTTTACTGA CGGGCACGGT
AATCCAAATG CCGACTATAT GGCGGCTGTG CGCAGGCGCT TCGGGCAGTG GATTCTCGAT
ACCTGCACCC GCCCGTATGA CGAGCAATGG TTGAATTATG CGTATGAAAT TGGTCTGCGT
CATCACCGCA GCAAAAAGAA CATCGTTGAC GGGGTGCAGG CTGTGCCACA CATCCACTAC
CGCTACATGG TTGCATTCAT CTATCCAATC ACGGCGACGA TCAGATCGTT CCTGGCAAAG
AAGGGACACT CTCCCGAAGA CGTTGATCGC ATGTACCAGG CGTGGTTCAA ATCGGTCGTG
ATGCAGGTGG CGCTCTGGAG CGTACCGTAT ATCAGGGAGG GCGATTACTG A
|
|---|
| Protein sequence | MMATAIPGYT YGTDQVAHAP LTMQDLDLLK QAVLFGPEDE QYLRMAGEVL ADQIDDVLDL
WYGFVGSHPH LVYYFTDGHG NPNADYMAAV RRRFGQWILD TCTRPYDEQW LNYAYEIGLR
HHRSKKNIVD GVQAVPHIHY RYMVAFIYPI TATIRSFLAK KGHSPEDVDR MYQAWFKSVV
MQVALWSVPY IREGDY
|
|---|
| |