Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1185 |
Symbol | rplC |
ID | 5208136 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1454828 |
End bp | 1455460 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640594802 |
Product | 50S ribosomal protein L3 |
Protein accession | YP_001275542 |
Protein GI | 148655337 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0087] Ribosomal protein L3 |
TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGAAG GGTTGCTTGG CCGCAAAATC GGCATGACCC AGGTCTTCGA TGCGACCGGA CAGGTCATCC CGGTGACGAT CATCGAAGTG GGTCCATGCG TCGTCACCCA GATTCGCACA AAAGAGCGGG ATGGGTACGA AGCTGTCCAG ATTGGCTACC AGGAAGTCAA GGCGAAAAGC CTGACCAGGC CTGAACAGGG GCATCTCCGT GGTGCAGGTA AGTTGCTGCG CCACCTGCGC GAGTTCCGCG CCGATAATAT CGCCGATCAC AAAGTCGGTG ATGTGTTGAC GGTCGAGATG TTCACACCAG GTCAGCGCGT CGATGTCATT GGCACATCGA AAGGTCGCGG GTTCCAGGGC GTGGTGAAAC GCCATGGCTT CGGCGGCGGA CCGCGCACGC ACGGTCAGAG CGACCGCCTG CGCGCTCCCG GTTCGATCGG CGCCGGCACC GATCCGGGTC ACGTGTTGAA GAATACCCGC ATGGCCGGGC GGATGGGCAA TCAGCGGGTA ACCGTCCAAA ACCTGACGGT CGTTGATGTC GTTCCAGAGC GTAATCTGTT GCTCGTGCGC GGCTCCATTC CAGGGGCTAA GAATGGATTG GTCATGGTTC GCCGGGCGAT CAAAGGCTCG TAA
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Protein sequence | MIEGLLGRKI GMTQVFDATG QVIPVTIIEV GPCVVTQIRT KERDGYEAVQ IGYQEVKAKS LTRPEQGHLR GAGKLLRHLR EFRADNIADH KVGDVLTVEM FTPGQRVDVI GTSKGRGFQG VVKRHGFGGG PRTHGQSDRL RAPGSIGAGT DPGHVLKNTR MAGRMGNQRV TVQNLTVVDV VPERNLLLVR GSIPGAKNGL VMVRRAIKGS
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