Gene RoseRS_1185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1185 
SymbolrplC 
ID5208136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1454828 
End bp1455460 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content60% 
IMG OID640594802 
Product50S ribosomal protein L3 
Protein accessionYP_001275542 
Protein GI148655337 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0087] Ribosomal protein L3 
TIGRFAM ID[TIGR03625] 50S ribosomal protein L3, bacterial 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAAG GGTTGCTTGG CCGCAAAATC GGCATGACCC AGGTCTTCGA TGCGACCGGA 
CAGGTCATCC CGGTGACGAT CATCGAAGTG GGTCCATGCG TCGTCACCCA GATTCGCACA
AAAGAGCGGG ATGGGTACGA AGCTGTCCAG ATTGGCTACC AGGAAGTCAA GGCGAAAAGC
CTGACCAGGC CTGAACAGGG GCATCTCCGT GGTGCAGGTA AGTTGCTGCG CCACCTGCGC
GAGTTCCGCG CCGATAATAT CGCCGATCAC AAAGTCGGTG ATGTGTTGAC GGTCGAGATG
TTCACACCAG GTCAGCGCGT CGATGTCATT GGCACATCGA AAGGTCGCGG GTTCCAGGGC
GTGGTGAAAC GCCATGGCTT CGGCGGCGGA CCGCGCACGC ACGGTCAGAG CGACCGCCTG
CGCGCTCCCG GTTCGATCGG CGCCGGCACC GATCCGGGTC ACGTGTTGAA GAATACCCGC
ATGGCCGGGC GGATGGGCAA TCAGCGGGTA ACCGTCCAAA ACCTGACGGT CGTTGATGTC
GTTCCAGAGC GTAATCTGTT GCTCGTGCGC GGCTCCATTC CAGGGGCTAA GAATGGATTG
GTCATGGTTC GCCGGGCGAT CAAAGGCTCG TAA
 
Protein sequence
MIEGLLGRKI GMTQVFDATG QVIPVTIIEV GPCVVTQIRT KERDGYEAVQ IGYQEVKAKS 
LTRPEQGHLR GAGKLLRHLR EFRADNIADH KVGDVLTVEM FTPGQRVDVI GTSKGRGFQG
VVKRHGFGGG PRTHGQSDRL RAPGSIGAGT DPGHVLKNTR MAGRMGNQRV TVQNLTVVDV
VPERNLLLVR GSIPGAKNGL VMVRRAIKGS