Gene RoseRS_1184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1184 
Symbol 
ID5208135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1454112 
End bp1454783 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content60% 
IMG OID640594801 
Productribosomal protein L4/L1e 
Protein accessionYP_001275541 
Protein GI148655336 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCCA GGTTGTACAA CCAGTCCGGC GAAGAGGTCG GCGTCATCCA GATATCCGAT 
TACGTTTTCG GGATTGAGCC GAATGTGCCG GTTATGCATC AGGCGATGGA ACGCCAGCGC
GCCAATGCGC GCCTTGGCAC CCATAATACG CTCGGTCGCG GTGAAGTCGA GGGGAGCACG
CGCAAACTCT ACCGTCAGAA AGGCACCGGT CGCGCGCGAC AGGGATCGAT CCGCGCGCCG
CATCGGAAAG GGGGCGGTAT TGCGCACGGA CCCCATCCGC GCAAATATAC CAAAGCCATG
CCGCGCAAAA TGCGCCGCCT GGCAGTGCGC TCGGCGCTCT CTGCGCGCTA CCGCGACGGC
GCGATTACTT TTCTGGATCG GTTGACGTTC GAGAAACCGC GCACCAAAGA CATGATTGCG
GTACTCAACG CGCTCAATCT GACCGGAAAG ACCTTGATCG TGCTGGACCA GAAGGATGAG
TACGTGCGTC GCTCGGCAAA TAATCTGCCG AATGTCAAGA CGCTGCTGGC GCACTATCTG
AACGTTATCG ATCTGCTTAC GCACGATCAT ATCGTGATGC TGCAGGCGGC GGTGGACGTC
GCTCAAGGGT ATCTCGACCA ACCGGAACAT GTCGTCGCGG CGGCGGGCGC GAGTGAGGAG
GAAGCGTCAT GA
 
Protein sequence
MEARLYNQSG EEVGVIQISD YVFGIEPNVP VMHQAMERQR ANARLGTHNT LGRGEVEGST 
RKLYRQKGTG RARQGSIRAP HRKGGGIAHG PHPRKYTKAM PRKMRRLAVR SALSARYRDG
AITFLDRLTF EKPRTKDMIA VLNALNLTGK TLIVLDQKDE YVRRSANNLP NVKTLLAHYL
NVIDLLTHDH IVMLQAAVDV AQGYLDQPEH VVAAAGASEE EAS