Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1184 |
Symbol | |
ID | 5208135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1454112 |
End bp | 1454783 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640594801 |
Product | ribosomal protein L4/L1e |
Protein accession | YP_001275541 |
Protein GI | 148655336 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0088] Ribosomal protein L4 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCCA GGTTGTACAA CCAGTCCGGC GAAGAGGTCG GCGTCATCCA GATATCCGAT TACGTTTTCG GGATTGAGCC GAATGTGCCG GTTATGCATC AGGCGATGGA ACGCCAGCGC GCCAATGCGC GCCTTGGCAC CCATAATACG CTCGGTCGCG GTGAAGTCGA GGGGAGCACG CGCAAACTCT ACCGTCAGAA AGGCACCGGT CGCGCGCGAC AGGGATCGAT CCGCGCGCCG CATCGGAAAG GGGGCGGTAT TGCGCACGGA CCCCATCCGC GCAAATATAC CAAAGCCATG CCGCGCAAAA TGCGCCGCCT GGCAGTGCGC TCGGCGCTCT CTGCGCGCTA CCGCGACGGC GCGATTACTT TTCTGGATCG GTTGACGTTC GAGAAACCGC GCACCAAAGA CATGATTGCG GTACTCAACG CGCTCAATCT GACCGGAAAG ACCTTGATCG TGCTGGACCA GAAGGATGAG TACGTGCGTC GCTCGGCAAA TAATCTGCCG AATGTCAAGA CGCTGCTGGC GCACTATCTG AACGTTATCG ATCTGCTTAC GCACGATCAT ATCGTGATGC TGCAGGCGGC GGTGGACGTC GCTCAAGGGT ATCTCGACCA ACCGGAACAT GTCGTCGCGG CGGCGGGCGC GAGTGAGGAG GAAGCGTCAT GA
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Protein sequence | MEARLYNQSG EEVGVIQISD YVFGIEPNVP VMHQAMERQR ANARLGTHNT LGRGEVEGST RKLYRQKGTG RARQGSIRAP HRKGGGIAHG PHPRKYTKAM PRKMRRLAVR SALSARYRDG AITFLDRLTF EKPRTKDMIA VLNALNLTGK TLIVLDQKDE YVRRSANNLP NVKTLLAHYL NVIDLLTHDH IVMLQAAVDV AQGYLDQPEH VVAAAGASEE EAS
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