| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1182 |
|---|
| Symbol | rplB |
|---|
| ID | 5208133 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1453000 |
|---|
| End bp | 1453827 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640594799 |
|---|
| Product | 50S ribosomal protein L2 |
|---|
| Protein accession | YP_001275539 |
|---|
| Protein GI | 148655334 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0090] Ribosomal protein L2 |
|---|
| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.566503 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGTCA AAAAGTATAA ACCAACCTCG CCAGGTCGCC GCAATATGTC GGTCTCGACC
TTCGAGGAGA TCACGAAGAA AGAGCCAGAG CGATCACTGC TCGAGCCGCT GCGCAAGAAA
GCCGGTCGTA ACAACTATGG TCGCATTACG GTGCGGCATC GCGGCGGCGG TCATAAGCGC
CACTATCGCC GGATCGACTT CAAGCGCGAC AAGATTGGGG TTCCGGCGAA GGTCGCGGCG
ATTGAATACG ATCCAAACCG GTCGGCGCGC ATTGCCCTGC TGCACTATGT CGATGGCGAG
AAGCGCTACA TCCTGGCGCC GCTCGGCTTG AACGTCGGCG ATACGGTGAT GAGCGGCCCC
GACGCCGATA TCCGGGTCGG CAATGCGCTG CCGCTGCGCC AGATACCGCT CGGTACACAG
GTGCATAACG TCGAACTGGA AAAAGGACGC GGCGGCGTGA TGGTGCGTAG CGCTGGCGCA
GCCGCGCAAC TGATGGCGAA GGAGGGCAAC TACGCCACCC TGCGCATGCC GTCAGGCGAG
GTGCGCCGCG TGTTCATCGA GTGTATGGCG ACGATTGGTC AGGTCGGCAA CCTGGATCAT
CAGAACATTC GCCTGGGGAA AGCCGGACGC AAACGCTGGC TTGGGCGACG ACCCGAAGTG
CGCGGCGCGG CGATGAACCC GCGCGACCAT CCGCACGGCG GCGGCGAGGG ACGCGCTCCG
CGCGGCATGC CCACCCCGAA GACCAAGTGG GGCAAACCGG CGCGTGGCGT GAAGACCCGC
CATAACCCGC GGACCGATCC CTTCATTATC CGCCGCCGGA CACGGTAA
|
|---|
| Protein sequence | MPVKKYKPTS PGRRNMSVST FEEITKKEPE RSLLEPLRKK AGRNNYGRIT VRHRGGGHKR
HYRRIDFKRD KIGVPAKVAA IEYDPNRSAR IALLHYVDGE KRYILAPLGL NVGDTVMSGP
DADIRVGNAL PLRQIPLGTQ VHNVELEKGR GGVMVRSAGA AAQLMAKEGN YATLRMPSGE
VRRVFIECMA TIGQVGNLDH QNIRLGKAGR KRWLGRRPEV RGAAMNPRDH PHGGGEGRAP
RGMPTPKTKW GKPARGVKTR HNPRTDPFII RRRTR
|
|---|
| |