| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1178 |
|---|
| Symbol | rplP |
|---|
| ID | 5208129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1451014 |
|---|
| End bp | 1451439 |
|---|
| Gene Length | 426 bp |
|---|
| Protein Length | 141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640594795 |
|---|
| Product | 50S ribosomal protein L16 |
|---|
| Protein accession | YP_001275535 |
|---|
| Protein GI | 148655330 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0197] Ribosomal protein L16/L10E |
|---|
| TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.371003 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.169961 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGATGC CGAAGCGTGT CAAATATCGC AAACAGCAGC GTGGCCACAA TCGCGGCATG
GCGCACCGCG GCAACACGGT TGCATTTGGC GAATACGGCT TGATGGCGCT CGAAGCGACG
TGGATGACAA GCCGTCAGAT CGAAGCGGCA CGCCGTGCCA TCAGTCACCA CGTCAAACGC
GGCGGGAAAA TCTGGATCCG TATCTTTCCA GATAAGCCAG TCACAGCCAA ACCTGCCGAA
ACCCGCATGG GATCGGGCAA AGGAGCGGTT GATCACTACG TGGCGGTCAT CAAGCCGGGG
CGTATTCTGT TCGAACTGGC TGGCGTCCGC CCTGAGGTTG CGCACGAGGC GCTGGAACGT
GCAGCGCAGA AACTGCCGAT CAAATGCAAA ATTGTTCCGC GCGAAGACCT GGAGGGCGCA
GCATGA
|
|---|
| Protein sequence | MLMPKRVKYR KQQRGHNRGM AHRGNTVAFG EYGLMALEAT WMTSRQIEAA RRAISHHVKR
GGKIWIRIFP DKPVTAKPAE TRMGSGKGAV DHYVAVIKPG RILFELAGVR PEVAHEALER
AAQKLPIKCK IVPREDLEGA A
|
|---|
| |