| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1169 |
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| Symbol | rplR |
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| ID | 5208120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1447511 |
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| End bp | 1447876 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640594786 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_001275526 |
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| Protein GI | 148655321 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0336131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0947713 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAAC GAACACCACG AGAACTGCGA ATCCGACGCC ATCGTCGTGT GCGGAAAAAA
GTCCACGGCA CTCCGCAACG ACCACGGTTG TGCGTCTTTC GCAGCAATAT GCATATCTAC
GCGCAGGTCA TTGATGACAC GGTTGGGCGA ACGCTGGCGG CAGCCTCCAC CGTGGAGCCT
GAACTGCGCG CATCGCTGAC CGGAAAGACG AAAACCGAAC AAGCGAAGGC GGTCGGCGCC
GTGATCGCTG AGCGTGCCAG AGCCGCTGGT ATTGAACGGG TCGTCTTCGA CCGCGGCGGG
TTCAAGTATC ATGGGCGGGT GCAGGCGCTC GCCGATGCAG CGCGTGCGGG CGGACTCCAG
TTCTGA
|
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| Protein sequence | MAKRTPRELR IRRHRRVRKK VHGTPQRPRL CVFRSNMHIY AQVIDDTVGR TLAAASTVEP
ELRASLTGKT KTEQAKAVGA VIAERARAAG IERVVFDRGG FKYHGRVQAL ADAARAGGLQ
F
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