Gene RoseRS_1165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1165 
Symbol 
ID5208116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1444711 
End bp1446063 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content57% 
IMG OID640594782 
Productpreprotein translocase, SecY subunit 
Protein accessionYP_001275522 
Protein GI148655317 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0201] Preprotein translocase subunit SecY 
TIGRFAM ID[TIGR00967] preprotein translocase, SecY subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000330141 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.11389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAGT CGGTTGTCAA TGCGCTCCGG TTGCCCGATC TGCGTCAGCG CATCCTGTTT 
ACGCTGGCAA TGCTGTTGCT CTTCCGGTTG ATCGCCCATA TTCCTGTGCC AAACATCGAT
CCGACGGCGC TGGAAAGTCT GCGGATCGCG CTGCAGGGGA ATCAACTGGC ACAGTTGCTT
AATATTTTTG CCGGCGGCGC ACTGCAGAAC CTGTCGGTGG CAGCGATGGG GGTCTATCCG
TACATCACTG CCCAGATCAT TCTGCAACTG CTCGTGCCGC TCATCCCGGC GCTGGAAGAA
TTGCGCAAAG AGGGTGAACA GGGGCGCATG CGCCTGAACC GCCTTACGTT TTACCTGACC
ATTCCGATGG CGCTGTTGCA GGCCTATGGG CAGACGCTGA CACTCGAACG CAGCCTTGGC
ACAGGGCAGG CGCTCTTCCA GACGCCGTTC GATATTGTGA ATAATTTCTT TCCGACCTTT
ACCATTCTGG TGAGCATGCT GGCGGGAACG ATGCTGCTGG TGTGGCTCGG CGAACAGATC
CAGGAACGCG GGATCGGCAA CGGCGTGTCG ATGATCATCT TCGCCGGGAT TGTCGCCGGG
TTGCCAGGGT TGATCATTCA GGCGTTTACA ACCGTCGAAC TGGGAGGCGT CGAGCAAATT
ATCGGGCTGG TGTCGTTCCT GGTCATCGCT CTGGGAACGA TTGTGGGGAT TGTCCTGATG
CACGAGGGGC AACGACGCAT CCCGGTACAG TACGCCAAGC GCGTGCGTGG CAATCGCGTG
TATGGCGGGC AGAGCAGCCA TATCCCGCTG AAGGTCAACA TGGCAGGTAT GATCCCGCTG
ATCTTCGCGC AGAGCATCAT CATCTTTCCG GGCACGATTG CATCGTATGC CTGCCCGGAA
CAGATTGCGC CGCCGGGATC AGGCGTCTTC AAGCAGATTG CGTGCTTTAC GTATCAAACG
TTTAGCCCGC AGTACGGCAG CGGGACGCTG GTGTACTCGA TTGCGCTGTT TGTGCTCGTC
TATTTCTTTA CCTACTTTTA CACAAAGGTC ATTTTTGACC AGCAAAACAT CCCGGAGACG
CTTCAGCGCA ACGGCGGGTT TATTCCGGGC ATTCGACCGG GGAAACGCAC CGAGGAGTAT
CTCGACCAGG TGGTGAGCCG GATTACGCGA ATCGGCGCGC TGTTCCTGGG TATTGTCGCA
ATTCTGCCCT TTATCACGCA GCAACTTACC GGTGTGCCAA TCGGGCTGGG CGCCACGGCG
CTGCTGATCG TGGTCGGTGT GGCAGTCGAC ACGATGCGAC AGTTGGAAGC TCAACTGGTC
ATGCGCAATT ATGAAGGGTT CATCAATCGC TGA
 
Protein sequence
MLESVVNALR LPDLRQRILF TLAMLLLFRL IAHIPVPNID PTALESLRIA LQGNQLAQLL 
NIFAGGALQN LSVAAMGVYP YITAQIILQL LVPLIPALEE LRKEGEQGRM RLNRLTFYLT
IPMALLQAYG QTLTLERSLG TGQALFQTPF DIVNNFFPTF TILVSMLAGT MLLVWLGEQI
QERGIGNGVS MIIFAGIVAG LPGLIIQAFT TVELGGVEQI IGLVSFLVIA LGTIVGIVLM
HEGQRRIPVQ YAKRVRGNRV YGGQSSHIPL KVNMAGMIPL IFAQSIIIFP GTIASYACPE
QIAPPGSGVF KQIACFTYQT FSPQYGSGTL VYSIALFVLV YFFTYFYTKV IFDQQNIPET
LQRNGGFIPG IRPGKRTEEY LDQVVSRITR IGALFLGIVA ILPFITQQLT GVPIGLGATA
LLIVVGVAVD TMRQLEAQLV MRNYEGFINR