| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1161 |
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| Symbol | rpsM |
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| ID | 5208112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1443041 |
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| End bp | 1443424 |
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| Gene Length | 384 bp |
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| Protein Length | 127 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640594778 |
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| Product | 30S ribosomal protein S13 |
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| Protein accession | YP_001275518 |
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| Protein GI | 148655313 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0099] Ribosomal protein S13 |
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| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000440374 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0874065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGCA TCGCAGGGGT TGACCTCCCG CGCAACAAAC GGATCGAAAT CGCCATTACG
TATATCTTCG GTATCGGGCG ATCCAACGGG GCTGAGGTGC TGCGTAAAGC AAACGTCAAC
CCCGCAACCC GGGTGCGCGA TCTGACCGAA GAGGAGGTTT CGCGGATCCG TGAAATTGTC
GAGCGTGAGT ATCGCGTCGA AGGCGATCTG CGCCGCGAAA TCCAGATGAA TATCAAGCGT
CTGATGGATA TCGGGTGCTA CCGCGGTCTG CGCCATCGCA AAGGCATGCC GGTGCGCGGT
CAGCGCACCC GCACCAATGC GCGCACCCGC CGCGGTCGCC GGGGTCAGGC GATTGGCATC
AAGAAGAAGA CAGTGAAGAA GTAA
|
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| Protein sequence | MARIAGVDLP RNKRIEIAIT YIFGIGRSNG AEVLRKANVN PATRVRDLTE EEVSRIREIV
EREYRVEGDL RREIQMNIKR LMDIGCYRGL RHRKGMPVRG QRTRTNARTR RGRRGQAIGI
KKKTVKK
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