| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1159 |
|---|
| Symbol | |
|---|
| ID | 5208110 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1441902 |
|---|
| End bp | 1442522 |
|---|
| Gene Length | 621 bp |
|---|
| Protein Length | 206 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640594776 |
|---|
| Product | ribosomal protein S4 |
|---|
| Protein accession | YP_001275516 |
|---|
| Protein GI | 148655311 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
|---|
| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000286157 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0899698 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCGCT ATCGAGGACC TGTAGGAAAA GTCAGCCGAC GCCTGGGGAT CGGCATTACG
GATAAGGGTC AGCGCATCCT GGCAAAACGG CCGTTTCCTC CGGGCCAGCA CGGACCGTCG
GCGCGTCGAC GGCAGGTGTC GGATTATGGG TTGCAACTGC TCGAAAAACA GAAGGCGCGC
TATGTCTATG GCGTGCTGGA ACGCCAGTTC CGCCGCATTT TCGAGAAGGC GCAACGCTTT
CCCGGTGAGA CCGGCGCGTA CCTGTTTATT CTGCTTGAGC GGCGACTCGA CAATGTCGTG
TATCGCCTGG GTTTCGCAAC TACCCGCGCC CAGGCGCGGC AACTGGTCTC CCACGGGCAT
ATTACGGTGA ACGGACGGAA AACGAATATC CCGTCGTATA CGGTGCGCGT CGGGGAAACG
ATAGCCGTTC GACCGGAGAG CCGCCGCCGC ACGTACTTCA AGAACCTGAT TGACAGCGGT
GCGCTCGCGC GCCATAAAAC ACCAGACTGG CTCCGCCTGA ATCCGGCGGA TCTGTCGGGT
GAAGTGGTTG CGATGCCGCG TCGTGAGGAT GCAGAGCCGG GCATCAACGA ACAATTGATT
GTTGAGTTCT ACAGCCGCTG A
|
|---|
| Protein sequence | MARYRGPVGK VSRRLGIGIT DKGQRILAKR PFPPGQHGPS ARRRQVSDYG LQLLEKQKAR
YVYGVLERQF RRIFEKAQRF PGETGAYLFI LLERRLDNVV YRLGFATTRA QARQLVSHGH
ITVNGRKTNI PSYTVRVGET IAVRPESRRR TYFKNLIDSG ALARHKTPDW LRLNPADLSG
EVVAMPRRED AEPGINEQLI VEFYSR
|
|---|
| |