| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1147 |
|---|
| Symbol | |
|---|
| ID | 5208098 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1432456 |
|---|
| End bp | 1433247 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640594764 |
|---|
| Product | IstB ATP binding domain-containing protein |
|---|
| Protein accession | YP_001275504 |
|---|
| Protein GI | 148655299 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1484] DNA replication protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000971836 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00111999 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAA ATACACCAGC GGCGCCTACG GCGATCTCTT CCGCCGCGGC AGCGACGTCT
CCGACCTCCA GTAGCGCGGA ATGTCCGCAC TGCGGCGGCG CCGGTTTCTA CAAGAAAGCG
GTTCCTTACG GTCATCCCGA TTTCGCCAGA CTCTTTCCGT GCGTCTGCAA ACTGGCGGAA
CAGGAGCAGC GCGACGCGGC GCGTCTGCTG GAGATCAGCA ACCTGGCGGC GTTCCTCGAT
AAGACGTTCG AGACCTTCAA CCCCAATGTA CCCGGCGTGC GCCGCGCCTA TCTGCGCGCG
CAGGAGTACG CCCGCCATCC ACGCGGATGG CTCATTCTGT TCGGCAACTA TGGCTGCGGC
AAAACACATC TCGCGGCTGC CATCGCCAAT CAACTGCTCC AGAACCACTA CCGCGTCCTC
TTTGCCGTTG TGCCCGACCT GCTCGACCAT CTGCGCTCGA CGTTCGGTCC GTCGAGCGAG
ATCGAGTACG ATCAACGGTT TGAGGATATT CGCGAAGCGG ACGTTCTCAT CCTGGACGAT
CTCGGCACAG AAAATACCAC TCCCTGGGCG CGTGAAAAAC TCTTTCAGAT CATCAACCAC
CGGTACAATT TTGCCCTGCC AACCGTCATT ACCAGCAATC GCAAACCGGA AGAGATCGAT
CCGCGCATCT TTTCACGCAT GTCTGACCGC GCCCTGTGTG AAGAACACAT CATTATCGAC
GCTGCCGATT ACCGTCGGTT GCCAATCGCG CAACGCTATC CAATCGCCGG GGCGCAACGT
CGCGTGAAAT AG
|
|---|
| Protein sequence | MSKNTPAAPT AISSAAAATS PTSSSAECPH CGGAGFYKKA VPYGHPDFAR LFPCVCKLAE
QEQRDAARLL EISNLAAFLD KTFETFNPNV PGVRRAYLRA QEYARHPRGW LILFGNYGCG
KTHLAAAIAN QLLQNHYRVL FAVVPDLLDH LRSTFGPSSE IEYDQRFEDI READVLILDD
LGTENTTPWA REKLFQIINH RYNFALPTVI TSNRKPEEID PRIFSRMSDR ALCEEHIIID
AADYRRLPIA QRYPIAGAQR RVK
|
|---|
| |