Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1145 |
Symbol | |
ID | 5208096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1428031 |
End bp | 1428870 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640594762 |
Product | hypothetical protein |
Protein accession | YP_001275502 |
Protein GI | 148655297 |
COG category | [S] Function unknown |
COG ID | [COG1624] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00159] conserved hypothetical protein TIGR00159 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00586351 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCGACA TTCGTAGCAT CCTGGAGTGG ATCAGTCGCC TCGCCGATCG CCTCAATCCC TTCGTTGACC CGCGCGCACT GCTTGATATT GCGATCGTCG CACTGATCTT TTACTGGCTG CTCGGCGTTA TTCGCGGCAC GCGCGCCGTG CAGTTGCTGC GCGGTTTTGG CATTCTGCTT GCGATTTCGA TTGCGCTGAG TTCGGTCTTG CCGCTCGAGA CGCTCCGCTG GCTGATCGAG AATGCGATCC AACCGGCATT GATTGTGGCT ATTCCGGTGT TGTTCCAGCC TGAGTTGCGT CGCGCACTGG AAAGCCTGGG GCGCACCAAT GATTTGCTTG GACGACCGTT CTCGCGCTCC AACCGGTCGG AGTTGATCGA AACGGTGATC GGCATCTCGC GCGCCGCGCA GCAACTCTCG CAGCAAGGCA TCGGCGCGTT GATGGTGATC GAGCGTGAGA CCGGACTACA GGAGTATGCC GATCGCGGCG TCATTCTCGA TGCACGACTC GCGGTGCCGC TCCTGCTCAA TATCTTCTAT CCCAACGCGC CGCTGCACGA TATGGCAGTC ATTGTGCGTG GCAATCGAAT CCTGGCTGCG AACGTTGTTC TGCCGCTCAG TGAAGATATT GTCGGACCAC GGCGTCTCGG CACACGCCAT CGTGCGGCGA AAGGCATCTC CGAACAATCC GATGCGATTG CAGTGGTGGT TTCTGAAGAA ACCGGTGCGA TTTCGCTGGT GCACGACGGG CGTATGGTGA GTTATCTGAA TGAAGCGCGC CTGCGAAACA TGCTGGCAGG TTTGCTCAAG GTGCAACTCG ATGAGGCGCT AAAAAACTAG
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Protein sequence | MPDIRSILEW ISRLADRLNP FVDPRALLDI AIVALIFYWL LGVIRGTRAV QLLRGFGILL AISIALSSVL PLETLRWLIE NAIQPALIVA IPVLFQPELR RALESLGRTN DLLGRPFSRS NRSELIETVI GISRAAQQLS QQGIGALMVI ERETGLQEYA DRGVILDARL AVPLLLNIFY PNAPLHDMAV IVRGNRILAA NVVLPLSEDI VGPRRLGTRH RAAKGISEQS DAIAVVVSEE TGAISLVHDG RMVSYLNEAR LRNMLAGLLK VQLDEALKN
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