Gene RoseRS_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1145 
Symbol 
ID5208096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1428031 
End bp1428870 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content58% 
IMG OID640594762 
Producthypothetical protein 
Protein accessionYP_001275502 
Protein GI148655297 
COG category[S] Function unknown 
COG ID[COG1624] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00159] conserved hypothetical protein TIGR00159 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00586351 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGACA TTCGTAGCAT CCTGGAGTGG ATCAGTCGCC TCGCCGATCG CCTCAATCCC 
TTCGTTGACC CGCGCGCACT GCTTGATATT GCGATCGTCG CACTGATCTT TTACTGGCTG
CTCGGCGTTA TTCGCGGCAC GCGCGCCGTG CAGTTGCTGC GCGGTTTTGG CATTCTGCTT
GCGATTTCGA TTGCGCTGAG TTCGGTCTTG CCGCTCGAGA CGCTCCGCTG GCTGATCGAG
AATGCGATCC AACCGGCATT GATTGTGGCT ATTCCGGTGT TGTTCCAGCC TGAGTTGCGT
CGCGCACTGG AAAGCCTGGG GCGCACCAAT GATTTGCTTG GACGACCGTT CTCGCGCTCC
AACCGGTCGG AGTTGATCGA AACGGTGATC GGCATCTCGC GCGCCGCGCA GCAACTCTCG
CAGCAAGGCA TCGGCGCGTT GATGGTGATC GAGCGTGAGA CCGGACTACA GGAGTATGCC
GATCGCGGCG TCATTCTCGA TGCACGACTC GCGGTGCCGC TCCTGCTCAA TATCTTCTAT
CCCAACGCGC CGCTGCACGA TATGGCAGTC ATTGTGCGTG GCAATCGAAT CCTGGCTGCG
AACGTTGTTC TGCCGCTCAG TGAAGATATT GTCGGACCAC GGCGTCTCGG CACACGCCAT
CGTGCGGCGA AAGGCATCTC CGAACAATCC GATGCGATTG CAGTGGTGGT TTCTGAAGAA
ACCGGTGCGA TTTCGCTGGT GCACGACGGG CGTATGGTGA GTTATCTGAA TGAAGCGCGC
CTGCGAAACA TGCTGGCAGG TTTGCTCAAG GTGCAACTCG ATGAGGCGCT AAAAAACTAG
 
Protein sequence
MPDIRSILEW ISRLADRLNP FVDPRALLDI AIVALIFYWL LGVIRGTRAV QLLRGFGILL 
AISIALSSVL PLETLRWLIE NAIQPALIVA IPVLFQPELR RALESLGRTN DLLGRPFSRS
NRSELIETVI GISRAAQQLS QQGIGALMVI ERETGLQEYA DRGVILDARL AVPLLLNIFY
PNAPLHDMAV IVRGNRILAA NVVLPLSEDI VGPRRLGTRH RAAKGISEQS DAIAVVVSEE
TGAISLVHDG RMVSYLNEAR LRNMLAGLLK VQLDEALKN