Gene RoseRS_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1131 
Symbol 
ID5208078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1408173 
End bp1409264 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content62% 
IMG OID640594744 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_001275488 
Protein GI148655283 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACTG TGGTGACCGT GCTGGGAACG CGCCCGGAGA TCATCAAACT CTCACCGCTC 
ATCCCGCTGC TGCGCGAGCG ATTTCGCCAC ATCCTGGTGC ACTCCGGGCA GCACTATTCC
TTCGAGATGG ACGCAGTATT TTTCGAGGAG TTGGGTCTGC CAGCGCCCGA TTACACCCTG
GCGGTCGGTT CGGCATCGCA CGGTGAACAA ACCGCGCGCA TGCTCTCGCG GCTGGAGCCG
ATCCTGCTTG CAACCCGACC CGATATGGTG CTGGTGCAGG GCGACACCAA CACTGCAATG
GCTGGCGGGC TCTGCGCCGC CAAACTCAAC ATTCCGGTCA CGCACCTGGA GTCGGGCGGG
CGATCCTTCA ACCGTCAGAT GCCCGAAGAA CTCAACCGCA TCATTCTCGA TCACATCTCG
ACATTGTTGC TGGCTGCCGA TGAAACGGCT GAACGCAACC TGCTGGCGGA AGGGTTGCCG
CCGGAGCGGA TCCGGATGGT TGGTTCGAGC GTTATCGATG CGGTCGAACG CAACCGGCAG
CACGCCCTAC GCTCAACCAT CCTGCAACGT CTGGAGGTGA CCCCCGGCGA CTACCTGGTG
CTGACGCTAC ACCGCAGCGA GAATACTACC CCCGACGTAT TGCCGGGCAT GATCCGCGCG
CTCGGAGAAC TGGCGGAAGA GCACACTATC ATCTTCCTGC TGCATCCGCG CACTGCCGCT
GCGATGCGAA CCTGTGGCAT CGAGATGCCG CGCAGTATTC GTGTGAGCGA GCCGCTGGGG
TACCTCGACA CCCTCAGGCT GGTCGAACAG GCGCGTGCGC TGTTGACCGA CTCTGGCGGA
TTGCAGGAGG AAGCCGGCGC ACTGGGAACG CCGGCGCTCA TCCTTCGGAA TGAGACTGAG
TGGCGCTATC TGGTCGATGC CGGCAGGCAT GTGTTGATCG GTAACACCCA TGAGTCAATC
CTTGCCGGGG CGCGCCGGTG GTTGCAACCA GAGGCGCTTG CCCGACTGCG TGCAGCGCCA
GCGCCGATCC GCAGCGGCGC CAGCGAACGC GCAGTGGCGG CGATGATCGA CGTTTTAGAA
AGCATCGCCT GA
 
Protein sequence
MKTVVTVLGT RPEIIKLSPL IPLLRERFRH ILVHSGQHYS FEMDAVFFEE LGLPAPDYTL 
AVGSASHGEQ TARMLSRLEP ILLATRPDMV LVQGDTNTAM AGGLCAAKLN IPVTHLESGG
RSFNRQMPEE LNRIILDHIS TLLLAADETA ERNLLAEGLP PERIRMVGSS VIDAVERNRQ
HALRSTILQR LEVTPGDYLV LTLHRSENTT PDVLPGMIRA LGELAEEHTI IFLLHPRTAA
AMRTCGIEMP RSIRVSEPLG YLDTLRLVEQ ARALLTDSGG LQEEAGALGT PALILRNETE
WRYLVDAGRH VLIGNTHESI LAGARRWLQP EALARLRAAP APIRSGASER AVAAMIDVLE
SIA