| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1126 |
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| Symbol | |
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| ID | 5208073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1402651 |
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| End bp | 1403358 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640594739 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001275483 |
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| Protein GI | 148655278 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACCG AACAACAGGT GGTGCTGATT ACCGGCGCGC GGAAGGGCAT CGGGCGCTTT
CTGGCGGAAC GATTCGTTCG CAACGGCGCG CTGGTCGAAG GATGCAGTCG AGAACCGCCC
GATTGGTCGC TGGAAGGGTA CACCCACCAT CTGGCGGATG TTACCGACGA GGCGCAGGTT
AAAGCGATGA TAACCGCTAT CGGGCGGCGT CATGGACGGC TCGATATTGT GATCAACAAT
GCTGGCGTCG CGGCGATGAA CCATTCGCTC CTCACGCCGC TCGCCTCGGT GGATCGAATC
TTCAACACGA ATGTGCGTGG CGTCTTCCTC GTGTGTCGTG AAGCAGCGCG ATTAATGCAA
CGGCGGCGCT TCGGTCGGAT CGTCAACCTG AGCACCGTCG CCGTTCCCCT GCGTCTGGAG
GGAGAGGCGC TGTACGCCGC TTCCAAAAGC GCCGTCGAAA TGTTGACCCG CATCCTGGCG
CGCGAATTCG GACCCCTTGG CATTACCGTC AACGCCGTCG GTCCAACGCC AATCGAGACC
GACCTCATCC GTGGCGTGCC GGCGGAGAAG ATTCAGAAGA TTATCGATAG CCTGGCGATC
CGACGGTTAG GTCGCTTTGA AGATGTGGCG AATGTCATCG ACTTCTTTGT GCGCCCCGAA
AGTGACTATG TCACGGGTCA GGTGATCTAT CTCGGCGGCG TGTCCTGA
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| Protein sequence | MTTEQQVVLI TGARKGIGRF LAERFVRNGA LVEGCSREPP DWSLEGYTHH LADVTDEAQV
KAMITAIGRR HGRLDIVINN AGVAAMNHSL LTPLASVDRI FNTNVRGVFL VCREAARLMQ
RRRFGRIVNL STVAVPLRLE GEALYAASKS AVEMLTRILA REFGPLGITV NAVGPTPIET
DLIRGVPAEK IQKIIDSLAI RRLGRFEDVA NVIDFFVRPE SDYVTGQVIY LGGVS
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