Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1123 |
Symbol | |
ID | 5208070 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1400037 |
End bp | 1400993 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640594736 |
Product | LamG domain-containing protein |
Protein accession | YP_001275480 |
Protein GI | 148655275 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.156274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAACT ATCGTCTCTG GTTCGTCCGC ATCCTGGCAG CGCTCTCAGG AGTCGCGTTT CTCGTCCTGA CCCCTGTTGC ACCCGCAGCG CCGCCGGTTC AATCAGCGCA TCCCGGCGCA GAACCGGCAA GCGCAGGCTA CGCGCTGCAA TTCTACGGTA ACGGCGTAAG CGATATCGAC CGGGTCAAGG TGCGGATCGA CCCTCCCACC CCCGCCGATG TCGGCGGCGA TTTCACCATC GAGTTCTGGC TGAAAACGAC CGCAAGCGGC GGAACCTGTA CGCCGGGCGC CTCCGGCGAC GGCTGGATCA CCGGGCGCAC GATCATCGAC CGTGATGTGT ATGGCGGCGG CGACCACGGC GATTACGGCA TTGCGCTGGC GTCCGGGCGC ATCTGCTTCG GCGTCGCGCG GGGAACGTCC GGGCGCACGA TCTACGGCAG CACGACTGTG GCGAACGGAC AGTGGCGGCA TATCGCCGTC ACGCGCAACG CCAGCAGCGG GCAGATGCAG ATCTTCGTCG ATGGACAACC CGACGCCAGC GGAACCGGCC CGACCGGCGA CATCAGTTAT CGCAACGGGC GCAGCACCGC CTACCCGAAC AGCGACCCCT TTCTGGTCTT CGGCGCGGAG AAGCATGACG CCGGACCGGC ATACCCATCG TACATCGGTC TGCTCGACGA TATTCGCGTC TCGAATGTGG TGCGCTACAC CGGCGCCTTC ACCCGCCCCG CGGCGCCGCA CGCGGTGGAT GGTTCGACCG TGGCGCTGTA CCGCTTCGAT GAAGGGAGCG GCACGACCAT CAGCGACGCG GCAGGTGGCG GCAGCCCTGG CGTGCTTCGC TTCGGCGGCT CGCCTGCCGG TCCGGTGTAT GTGACCGATA CGCCATTTGG CAGCACACCT CCACCTCCGC CGCCGAACCT TGAGCCACGC GCCTATTTGC CGCTGGTGGT GCGCTGA
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Protein sequence | MRNYRLWFVR ILAALSGVAF LVLTPVAPAA PPVQSAHPGA EPASAGYALQ FYGNGVSDID RVKVRIDPPT PADVGGDFTI EFWLKTTASG GTCTPGASGD GWITGRTIID RDVYGGGDHG DYGIALASGR ICFGVARGTS GRTIYGSTTV ANGQWRHIAV TRNASSGQMQ IFVDGQPDAS GTGPTGDISY RNGRSTAYPN SDPFLVFGAE KHDAGPAYPS YIGLLDDIRV SNVVRYTGAF TRPAAPHAVD GSTVALYRFD EGSGTTISDA AGGGSPGVLR FGGSPAGPVY VTDTPFGSTP PPPPPNLEPR AYLPLVVR
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