Gene RoseRS_1110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1110 
Symbol 
ID5208057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1385048 
End bp1385536 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content59% 
IMG OID640594723 
Producthypothetical protein 
Protein accessionYP_001275467 
Protein GI148655262 
COG category[S] Function unknown 
COG ID[COG1839] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.319253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.105314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTGA CCATCGTACC GGTTGAAAAC CCGAATGGAC TGAACATCAT CCTGGGGCAG 
ACGCATTTCA TCAAGACCGT CGAAGACATT CACGAAGCGC TGGTCAACAC CGTCCCCGGC
ATCGCTTTCG GATTGGCGTT CTGTGAGGCG TCCGGCAAAC GTCTGGTGCG CTGGAGCGGC
ACCGACGAGG CATTGATCGA CCTGGCGCGG CGCAATGCAC TGGCGATCGG CGCCGGGCAT
ACGTTCATCG TGGTTCTGGG GACGGGATAC TATCCCATCA ATGTGCTCAA CGCAATTAAG
GCAGTCCCCG AAGTCTGCCG CATCTTCTGC GCCACCGCCA ACCCGCTCGA GGTAGTCGTC
GCCGTTACCG ATCAGGGTCG CGGCGTTCTT GGGGTAATCG ATGGCGCTTC GCCACTGGGA
GTCGAAGGTG ATGAGGATAT TGCCTGGCGC AAAGGGTTCC TGCGGCAGAT CGGGTATAAG
CTCGGCTGA
 
Protein sequence
MQLTIVPVEN PNGLNIILGQ THFIKTVEDI HEALVNTVPG IAFGLAFCEA SGKRLVRWSG 
TDEALIDLAR RNALAIGAGH TFIVVLGTGY YPINVLNAIK AVPEVCRIFC ATANPLEVVV
AVTDQGRGVL GVIDGASPLG VEGDEDIAWR KGFLRQIGYK LG