Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1110 |
Symbol | |
ID | 5208057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1385048 |
End bp | 1385536 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640594723 |
Product | hypothetical protein |
Protein accession | YP_001275467 |
Protein GI | 148655262 |
COG category | [S] Function unknown |
COG ID | [COG1839] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.319253 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.105314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACTGA CCATCGTACC GGTTGAAAAC CCGAATGGAC TGAACATCAT CCTGGGGCAG ACGCATTTCA TCAAGACCGT CGAAGACATT CACGAAGCGC TGGTCAACAC CGTCCCCGGC ATCGCTTTCG GATTGGCGTT CTGTGAGGCG TCCGGCAAAC GTCTGGTGCG CTGGAGCGGC ACCGACGAGG CATTGATCGA CCTGGCGCGG CGCAATGCAC TGGCGATCGG CGCCGGGCAT ACGTTCATCG TGGTTCTGGG GACGGGATAC TATCCCATCA ATGTGCTCAA CGCAATTAAG GCAGTCCCCG AAGTCTGCCG CATCTTCTGC GCCACCGCCA ACCCGCTCGA GGTAGTCGTC GCCGTTACCG ATCAGGGTCG CGGCGTTCTT GGGGTAATCG ATGGCGCTTC GCCACTGGGA GTCGAAGGTG ATGAGGATAT TGCCTGGCGC AAAGGGTTCC TGCGGCAGAT CGGGTATAAG CTCGGCTGA
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Protein sequence | MQLTIVPVEN PNGLNIILGQ THFIKTVEDI HEALVNTVPG IAFGLAFCEA SGKRLVRWSG TDEALIDLAR RNALAIGAGH TFIVVLGTGY YPINVLNAIK AVPEVCRIFC ATANPLEVVV AVTDQGRGVL GVIDGASPLG VEGDEDIAWR KGFLRQIGYK LG
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