| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1105 |
|---|
| Symbol | |
|---|
| ID | 5208052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1380988 |
|---|
| End bp | 1383087 |
|---|
| Gene Length | 2100 bp |
|---|
| Protein Length | 699 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640594718 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001275462 |
|---|
| Protein GI | 148655257 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0247429 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCCT TTGAAGTTGC GCCACATACA CATATCCTTC GTTTCCGCGA ATGGATGACG
CGATACGCCG TCATGCCATT GTTGCTGGCG CTCGGATGGG TCGGGGCGCT CGCGCTCCTG
GGATCGTCTG ATGTTCTCTG GTGGGCGCTG TCGAATGCAG GGCGACTTGC ATTGCTGGCA
GGATCAGCGC TGGCGTTGTG GGTGGCGCCG GGTATGGCGC TGATCCGGTT GCTCTGGCGC
GATCACAATC TGTCCGTGAT CGAGTATATC GGCGTGGCGT GGGGCGTCGG CACCGCTCTG
CCGCCGCTTC TGTTGCTTGC GATGGATATC GTGAACCTCC CATGGAATCG CACCGCAACT
GTGGCATACG TTGCCGTGGC TGCGATGATC TGGCTGTTCA CGATATGGCG GCAGGCGCCG
CGTGCGAGCG ATGAGCGCCG CAATGTTCCG CTGCGTCTGT CGGGTTCTGT AACGGCGGTG
ATGGTTGGTC TCGTGGTGCT GGCGCTGATT GCCCGGCTCT ATACCACGCG CAATCTGCTG
GTTGGGGCGA ATGTCGATAG TTACCACCAT ACTCTGATCG TTCAATTGCT GGTTGAACAC
CAGGGATTGT TCCGTTCTTG GGAACCGTAT GCACCGCTGG TGACGTTTAC CTATCATTAC
GGTTTTCATG CCAGCGCTGC CTTCCTGCAC TGGCTTACCG GTATTCCTGT CACTCAAGCG
GTTCTCGACG CCGGGCAGAT GATGAACGCG GCAACGCTCC TTGCCGTCTT TGCGCTGACT
GTTCGACTGA CCGGCAGCAG TGTTGCCGGT ATGTGGGCGG CATTGATTGT CGGTTTCTAC
AATACGCTGC CGGCGTTCCT GGTGTTTTGG GGACGTACCA CGTCTCTCAC CAGTCACGTG
GTTCTTGCTA TAGTTTTGGT TATGTGGATG GCTGCCATCG AAACAGAACG CCATGACTGG
CGACTGATCG CGCTGACTGC AATCGTCAGC GCCGGTCTTG CTCTGTGCCA CTACCAGACG
ACGATCTTGG CAGCGCCAAT GATCCTGGTC TACCTCCTGG TGATCCGGCT GCATTCACCG
CCAGACGCGA TTCTGGCGAC GCTGGGGCGT GTCGTGGCGA TCGGCGCCGG CGCCGGGTTG
TTGATCCTGC CGTGGATGCT GAATGTGAGC AGCGGTCACC TGGACCGTAA TGTGGCGCAC
CTGACAGGTC CAGCAACGGT AGCCAGGCAG ATGTTCGAAT CAACGATACC GGCGGTTGCA
CCACTCTTCC TCAAGGGTCC GGTGATTGGC GCAGCCATTG GCGGGATGCT GCTCGCAGGG
CGACAACGTT TGTGGCGTGC GCTGCTGCCT GCCGGGTGGA CGCTGGCAAT GCTGGCGACG
GTCATGCCGC ATGTGATCGG ATTACCGGGC ACAGGTGTGG TTGATGGGGG ATTTATCGCA
ATGACGTTCT ACCTGATGGC GGCGCCGCTG GCAGGAATGA CGCTGGCAGC AGTCTGTACG
GCGCTGGAGC GTGTCGCATC GCGCCTGATA TTCGTTCCGA TCGTGGTATT GATAGTCGTG
AGCGCCTGGG GTGTCGGCTG GCAGCGCAAT CTCGTGTCTG ATTATATGCG TATGGTCACG
CCGGCCGATG TTCAGGCGAT GGCATGGGTG CGTGAACATA CGCCGCCCGA CGCTCGCTTC
GTTGTGAACA GCTACCCGAT TTATAGCGGC GATATGGTCG CTGGCGTTGA TGCCGGTTGG
TGGATACCGT TCTTTGCCAG ACGTCAAACG AACGTGCCGC CTATGACGTA TGGCAGCGAA
CTGGCTGCCG ATCCGCAGTA TGCAGCCGAA ATCCATGCCC TGGCGCGCGA TCTGCGCCGC
CGTCCGTTGA CTGATGTGCG AGGCGTTCTG GTGGATCTGA CTCTTCCCGA AACGATCGAA
CGGTTGCGCG CTGCCGGTTA TACCTACGTC TATAGCGGCG CACAGCTGCT TGCTGGTCCT
GGTCCTCTGG TGTTTGCTGC ACCTGACCGG ATCGATACTG CGCGGTTACG CACAAGTCCG
CATTTCCGCC TGGTGTACGA TCACGGTGGT GTTGAAATCT TCGAACTGGT GACGCAATGA
|
|---|
| Protein sequence | MKPFEVAPHT HILRFREWMT RYAVMPLLLA LGWVGALALL GSSDVLWWAL SNAGRLALLA
GSALALWVAP GMALIRLLWR DHNLSVIEYI GVAWGVGTAL PPLLLLAMDI VNLPWNRTAT
VAYVAVAAMI WLFTIWRQAP RASDERRNVP LRLSGSVTAV MVGLVVLALI ARLYTTRNLL
VGANVDSYHH TLIVQLLVEH QGLFRSWEPY APLVTFTYHY GFHASAAFLH WLTGIPVTQA
VLDAGQMMNA ATLLAVFALT VRLTGSSVAG MWAALIVGFY NTLPAFLVFW GRTTSLTSHV
VLAIVLVMWM AAIETERHDW RLIALTAIVS AGLALCHYQT TILAAPMILV YLLVIRLHSP
PDAILATLGR VVAIGAGAGL LILPWMLNVS SGHLDRNVAH LTGPATVARQ MFESTIPAVA
PLFLKGPVIG AAIGGMLLAG RQRLWRALLP AGWTLAMLAT VMPHVIGLPG TGVVDGGFIA
MTFYLMAAPL AGMTLAAVCT ALERVASRLI FVPIVVLIVV SAWGVGWQRN LVSDYMRMVT
PADVQAMAWV REHTPPDARF VVNSYPIYSG DMVAGVDAGW WIPFFARRQT NVPPMTYGSE
LAADPQYAAE IHALARDLRR RPLTDVRGVL VDLTLPETIE RLRAAGYTYV YSGAQLLAGP
GPLVFAAPDR IDTARLRTSP HFRLVYDHGG VEIFELVTQ
|
|---|
| |