Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1104 |
Symbol | |
ID | 5208051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1379801 |
End bp | 1380991 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640594717 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_001275461 |
Protein GI | 148655256 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0552505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00694846 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAGATTA CTCTGATCGG TCCGACCTAC CCGTTCCGTG GCGGCATTGC GCACTATACG ACCCTGCTGA CGCATCATCT GCGCCAGCGC CACGATGTGC GGTTGATTTC CTACATCAAG CAGTATCCGA AGTGGCTCTA TCCCGGCAAC ACAGCAATGG ATCCCAGCCC CGACGAAAGC GCGCTGCGTG TGGAGTGCGA CCGGGTGCTG ACGCCAATGA ATCCGCTGAC ATGGTGGCGC GCCTTTCGTA TGATCCAGCG CGATAACCCG GATCTGCTGC TGCTCCAGTG GTGGACGCCG TTCTGGTCGC CGATGCTGTT TGTGCTGACC CGTCTGGTGC GACGTTATAC GAATGTGCGC ATTCTGTTCT TGTGTCATCA CGTCATCGCT CCCGACGGCG GCATGTTCGA CTGGTATCTG GCACGGCGCA TTCTGTGGCG CGGTCACGCA TTCATTGTGA TGAGCGAGGA GGATTTTGCC CTGCTCCGGC GTGCGCTTCC GTGGGCGCGC ATCCGGGGTG TCACCCATCC ACCCTACGAT GTGTTCAGTC GCACATCGCT ACTGCGCGTC GAGGCGCGCG CCCGCCTTGG GTTGGATCCG GATGAACCGG TGCTGCTCTT CTTTGGCTTC GTGCGACGCT ACAAAGGGTT GCGTCACCTG ATCCAGGCGC TGCCGCTGAT ACGACAGCAT GTTCCGGTGC GTTTGCTGGT CGTTGGCGAG TTCTGGGAAG ATGACCGCCC CTACCGCGAA CTGGTGCGGA ACCTGAATCT TGGTGATGTG GTGCATTTCC ACAGCGAATA TGTCCCCAAC GAGCAGATTG CAGTCTACTT CTCCGCCTGC GATGCGGTCG TTTTGCCCTA TCTGGAAGCG ACCCAGAGCG GCGTGGCGCA ACTGGCGATC GGGTTCGAGA AGCCGATGAT CGCCACCTCT GTCGGCGGTA TGCCCGAAAC GATTCATAAC GGTGAAACCG GGTTGATCGT GCCTCCCGGT GACAGTGCAG CGCTGGCGGA TGCAGTGGTG CGCTTTTTTC GCAATGGACT GGCTGAGCCG TTCACCCGGA ATATCCGCAC GGTGCGCGAG CGCGACTCCT GGCTGCCGCT GGTGCATCTG ATCGAGGAAC TGGCAGAACC GGCGAGTGCG CCGCAAACTG AACAACCTGC GCCGCAAACA GCGTCGCCAA GAGTGCTGTA G
|
Protein sequence | MKITLIGPTY PFRGGIAHYT TLLTHHLRQR HDVRLISYIK QYPKWLYPGN TAMDPSPDES ALRVECDRVL TPMNPLTWWR AFRMIQRDNP DLLLLQWWTP FWSPMLFVLT RLVRRYTNVR ILFLCHHVIA PDGGMFDWYL ARRILWRGHA FIVMSEEDFA LLRRALPWAR IRGVTHPPYD VFSRTSLLRV EARARLGLDP DEPVLLFFGF VRRYKGLRHL IQALPLIRQH VPVRLLVVGE FWEDDRPYRE LVRNLNLGDV VHFHSEYVPN EQIAVYFSAC DAVVLPYLEA TQSGVAQLAI GFEKPMIATS VGGMPETIHN GETGLIVPPG DSAALADAVV RFFRNGLAEP FTRNIRTVRE RDSWLPLVHL IEELAEPASA PQTEQPAPQT ASPRVL
|
| |