Gene RoseRS_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1101 
Symbol 
ID5208048 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1377116 
End bp1378750 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content39% 
IMG OID640594715 
Producthypothetical protein 
Protein accessionYP_001275459 
Protein GI148655254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000465814 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000243777 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCTTTTGA ACCAATACAT AGACGCTGTA TTTGCGAGAA TACACAAACT TTCACCTCGC 
ACCGTGTTTT TGACACTAAT CTTTCTTTTC ATCTTAGTTG TAACTACTAA TGGGATAGGA
CCGACTCCCA AACACTATCA AGAACTATCT CAAAATCCAT TTGTTGACAG TGTTGACATC
GTCGACTACT GGCAAGAAAG TGTGCTTTTG CCTCTTATCG CTTATTATAC TCAAATGAAT
TCAAAAACTT CTTTCTACAT TTTATGTCTT CTCATCTATG TGATATCGTG GCTGATATTT
GCTAAGCTAA CTCTTAATCG GTTTGGTGTT GCACCCGCCT TGATTTTTAC CTCTGTTCTA
ATAACCAGTC CGCTGACGAC CACTACACTT TCGTGGCTGG GAAGCGTAGA TAGCCTGACC
TTTGCCCTGA CAATGCCCTT CATTTTTACA CATTCGAAGT TGTTAATACT CATTCTTTCC
ATTCTCGGTC CGATGAACCA TATTGTTTTC ATAATAGCGA CGGGTGAAAT TCTGGTGCTG
AGGCTGATTA GTCGCAACAA GATCGTCACA GACCATCTTA TAACCGCAAT AGCCGGATAT
ATAGTAGGTT TTGGATTGCT TAAGTTATTT CTGGCGTCAA ATCAGTTTCA TATCAGTGAA
TCTCGCTTAG ATTTTATTCT TAACAATATA GAGCTTTGGA TATATATGAA TACCGCCCCA
TCTCACTATA CGTCTTTCCT TTCACTCTTT AGTATTCAGT GGTTGGTAAT TATTATTTGT
GTGTTGATAT TTTATAGGAT AGATAGAGTT TATTATTCTC TTCTTATTAC ACTGCTGATA
TTGAACATGG GAATAACTTT CTTTACAGCA GATACGACGA GAGTTTTTTC ACTCCTTTCC
TGGGGCGTGC TCGCTGAATG CATGTTCTAT TCTTACCGAC TCGCTCTAAC TCAAGAGGAT
AAAAATTTTC AAAAACAATA TCTGGTATCT TTATTCATTA TTGGACTTAT ATCTTTATTA
GTTCCTCGTT ACTATTCTTT TTTAGGATCC ATCTATCATC CACCGTACTT TCAGTTTGCT
GTAGATGTTG CGAACTCTCG CGCAAGTTTG ACATGGATTG CAGCAGTATT TTTCATCTTC
TCTGTCGGAG TACTATCTCT TCTCAAGGTC AAGATGAAAC TTGTCTGGTT CTATTCAATA
TCTTATTTCC TGCTTACAGC AGGAATATCC CTTTCGTTGG TATTCTATTC ACCATCCTAT
TTTCGATCTG TGGCTGCTCG TCTTCCATCT GAGGTGGGCA GGAATAATGA TGGAATAAAA
GAAGCCGTTG AGGGAGAACG AGGATTTCTA AGCTTCGGTC CGTACATCAA TCTAAAATCG
GGTGATTATG TTGCGGTGTT CACATACAAA AGCCAACCGT CCTACGAAAC AATTATCGGC
TGGGTTGACG TTACCACTGA TAAAGGTCAA GACGTAATTG TAAAGAAGGA GGTCTATGGA
ACGGAAGATG TTCTCAGTCG TATTGAAATA CCGTTCAGTC TTCAAGAAGA TGAGAAAGAT
GTTGAGGTCA GGTTTTGGTA CGAAGGAACA GGCTCTGTTT CGTTGCACAT GCTGGAAATT
AGACAACAAA AGTGA
 
Protein sequence
MLLNQYIDAV FARIHKLSPR TVFLTLIFLF ILVVTTNGIG PTPKHYQELS QNPFVDSVDI 
VDYWQESVLL PLIAYYTQMN SKTSFYILCL LIYVISWLIF AKLTLNRFGV APALIFTSVL
ITSPLTTTTL SWLGSVDSLT FALTMPFIFT HSKLLILILS ILGPMNHIVF IIATGEILVL
RLISRNKIVT DHLITAIAGY IVGFGLLKLF LASNQFHISE SRLDFILNNI ELWIYMNTAP
SHYTSFLSLF SIQWLVIIIC VLIFYRIDRV YYSLLITLLI LNMGITFFTA DTTRVFSLLS
WGVLAECMFY SYRLALTQED KNFQKQYLVS LFIIGLISLL VPRYYSFLGS IYHPPYFQFA
VDVANSRASL TWIAAVFFIF SVGVLSLLKV KMKLVWFYSI SYFLLTAGIS LSLVFYSPSY
FRSVAARLPS EVGRNNDGIK EAVEGERGFL SFGPYINLKS GDYVAVFTYK SQPSYETIIG
WVDVTTDKGQ DVIVKKEVYG TEDVLSRIEI PFSLQEDEKD VEVRFWYEGT GSVSLHMLEI
RQQK