| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1097 |
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| Symbol | |
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| ID | 5208044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1365717 |
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| End bp | 1370963 |
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| Gene Length | 5247 bp |
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| Protein Length | 1748 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640594711 |
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| Product | large extracellular alpha-helical protein-like protein |
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| Protein accession | YP_001275455 |
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| Protein GI | 148655250 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2373] Large extracellular alpha-helical protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000683737 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGCGTTTTC TGCGACAGGT CGGTTTGATC TGGACTGCCG CCCTGCTGGT CGTTGTTCTG
GCGTCTCTGG CGCTGCCTGG AGCGCGCTTT CTTCTTCTCC CCTGGCTCTC CGACTCGCCT
GTGGTTGTGG CGGTCTCGCC GCCTGATGGG GCGCGTGATG TTTCGCCGCG CACAGCGTTG
ATCATTCAGT TCAACACGCC GATGAATCCG CCCGGCGTCG AACGTGCGTT GCGCATCGAA
CCCGAGAGCG ACGTCGTCTA CGCCTGGGAT GATTCGCGTA CAACGCTGAC TGTCACACCA
ACGAAGACGC TCCAGGCAGG CATGCGTTAT CGGGTCAGCA TCGATGAGAC GGCGCTGAGC
CGGTTCTTCC GCCCGCTGGA GGAACCGTTC GTTTTCACAT TCGAAACAGC GCCGCCGCCA
GCGGTGACTT CTCTGTGGCC CCGTGATGGC AGCGTTGAGG TTCCTGTCGA TACGCTCATC
AGTGTGCGGT TCAGCCGATC CATTGTTCCT CCCGACCGGC TTGCCGTTCC TGAATTGTCA
CCTGCGTTCC GCACCGATCC GCCGGTTTCC GGCAGTGTTG TCTGGATCGA TCCTGCCACG
CTTCTCTTTC GCCCGGATCA ACCGCTTCGT CCCGGTGTTC GTTATACCTG CTCGCTATCG
CCTGATCTGA CCGATCAGAG CGGTACGCCG CTTGGTCGCG CCTATTCCTG GTCGTTCACC
ACGCTGGCGC CAACCGTGCT CAGTGTGTCG CCGCCGCCAA ATGCGCGTCA GGTTGCGCTC
CGCGAGCCGC TGCGCATCGT TTTCTCGCAG CCGGTCGATC GGCAGGCGCT CGAAGCGGCG
CTGTCGGTGA CACCGCCGAT GCCCGGCGCT CTCGAGGACG CCGTGTTGCC CGACGGAACG
CAGGTTGTCA CGTACACCCC GACTGCTGAA TGGCAGGCTG GCGTTGTGTA TACGATTGCC
CTTCCAGAAA AGACGGCGGA TGGAAGTCCG CTGCTGGTAA AGCCGTATCG ATGGAGTTTT
ATGACGGCGC CAAAGCCAGC GCTGATCGGA AGGTTCCCCG GTGAGGGTCA ACTGCTTCCG
CCGGGAGGCA GTGTGCGGTT GATCTTCAGC ACCCCAATCG ATGCTGGCGC CCTGCGCGAC
AATCTGCGCG TCGAACCGCC GGTTGCACAT CTGCGGGTCG TCACGAACGA CGGTGAAGCG
CGCATTGATG CGCAACTTCA GGCTGCCACC CTGTATACGA TAACAATACC GGCTTCGCTT
TCAGATCGCG CCGGTGTTGC GCTGGAGCGT GACTATCAGG TTCGCTTTTT TACCGCACCG
GCTGCACCAT CGCTCACGCT GCCGGAAGCG AATGGTCGCG TTATACGGTC GCTCCCTGAT
CGAGCGATTG ACCTGCTGAC GCGGCGGACG AACCTCTCGG AATTGCGGTT GACGCTCTAT
CCGCTCGATG AGGCGACGTT GTTGCGTGCG TTGAGTTTCA GCGATGCCGA GTGGACGTCG
TTCGAGCCGG CGCGCTATGG TCTGTCACCT TTGCGTTTCT GGACACAGCC GCTGACCGAT
CCGCTCAATA CAGTCGTCGA AGAGCGAGTG ACGGTGACCC TCGATGGTGG CGCGCCGCTG
CCGCCGGGTT TCTACTTCCT GCGCATACGC TCGCCTGAGC GTGCTGGCGC TGGCGTTCTC
CTGGCGGTGT CGCGTGTCAC GCTCTCGTTT CAGGTCGTCG GACAGCGCGC CATCGTATGG
GTGACGGACA TCGCCAGTAC ATCGGTCATT TCCGACACGC CGCTGGCGCT CTACCGGCAG
GGAACACTGA TCGCCGTCGG ACGCAGTGAT GAGCGCGGGG TGTGGGAAAC CGATCTGTCT
GGCGTCAATC CGCGCGATCT TGTCGCTGTT GCTACGCTTC TGCCCGCCTT CGCCACACCG
GAGGCGCCGG TGCAATCGGC GCCTGCGCCA CGCCTGCGAG TCATCCTGGC GACGGATCGA
TCCATCTACT CTCCGGGCGA ATCGGTGGCG ATCCGTGGCT TCATTCGCCA GGAGGGATCA
CAGGCATTCG AGATTCCTGA TCCGGGACAG TCGCTGGACC TCGACATCCA GGGTCCGTCG
GGTGTCCGCC TGCGAAAGCG GATTGTTCTC GATGCCTCAG GAATGATCGA CGCGACGCTG
GCGCTTCCCG CCAATGCGCC GTCTGGCGTC TATCGCCTCT TCACTCCTCG CGATGAGCGT
GCGGCGCTCC AATTTTATGT GCATCCGCCT TCGTCGCCAT TACGTGCGTC AATCACGCGC
ATAACGCAGG ATCAGGTCGT CGTCTCTGTC CGTACACCGG AAGATCTTCC GATTGCAGGC
GCAACGATTA CCTGGACAAT CGATCCAGAA CCGATACTGC TGCCGGTCAG GGATGACTTC
GTGTTCAGCC GACCGGAAAC GCCGCTTGCA TCTCTGTCAG GTGTCGGCGT CACTAATGAA
CAGGGTATGC TGACACTCGC GCTCCCTTCA GACTGGTATC ACGTTCGCAT CCAGGCGCAG
ATTGTCGAAG CTGGCGGACT GGCGGCGACG CTTGATCGAA CGATCTATAC AGCACCCGCA
CCGGCAGTCG GTCTGCGGGC TGCGACATCG CTCGTGGGTG CAGGAGGTCA GACAAGCGTC
GAGGTGGTGA CCCTGGCGGG CGATCAACCG CTTGCCGCGC AGCGCGTGCA GATCGATGCA
GTGCGGCTCA ACGGCGAGAC TGCCAGTGAT ATGGGCGTGT CGCCATCCGA ATGGCAACTC
CTGAGTCGTG TGATCACCAC CGATAACGAT GGACGGGCGA CATTCGCTGT GTCGCTTCCT
GAACCGGGGG TATACCGGGT TCGTGCAGCG CTGGTCGGCG GCGGTCTGGC GTCTCCGCCG
ACCGATATTG TTCTGCGTGC GTATCAGCCC GGTTTTACTG CCTGGAGCGA ACCTCGCACC
AGCGTGTCGC TGGTTGCTGA TCGCGCGCGG TATCAACCTG GCGATACGGC ATTGCTTTTG
CCGCTGGCGC CGATCCCGGA AGGTCTGGCA TTGCTGACGG TTCAACGGGC GTCAGGGGAT
GTTGTGACCG AACTTCGCAC TGTGCGCGCT GGAGAACCGC TGACGCTCAC GTTGACCCCC
GCCGATGCGC CGGTTGTCCG GGTTACGTTG ACGTCTGGGG TGCAGTCGCC AGCGTATCGG
CGGTTACAGG TCGATGTGCC GGTGACTGCG ATCACTCCAT CGCTCCTGGC GACAGTGACG
ACCGATGCAC AGACGTATGA TCCGGGAGCA ACCGCAGCGC TGACGATCAC CGTTACGGAT
GCGCGTGGCG CTCCAGTGTC TGCGGATGTG CTGGTGCGAA TTACGGCAGG CGATGATGAT
CGGCAGGAAC CCGTCGTCTG GCGCACCGGG CGAACGGACA GGAACGGCGT GATCCGCTTC
GATGCACCGT TGCCCCAGAC CCCAGGCACA CATGAGGTGC GGGTATGGGT TGCGGGTGAA
CGTGGCTTTG GTGTAACCGG AGCTGCGTTG CAGGCAAGGC AACCAATTGT TGGGCAGATT
GTTGCGCCAC AGTTCGCGCG CGCCGGGGAT CGGTTCGTTG TCGGCGTGCG TCTCACCACG
CAAGAGGATG TCCCGCGTCA GACGCGCATC ACAATGCGGA TGCCAGATGG AACCGCCGTT
GTGCAGACAA CCGCAGTTCC CACAGAAGGC GCTGCGTTAG CGACGTTCAC GGTGCAGGCG
CCGTCATCTG GCGCTGCCAT GGCGGTGCAG GCGATTGTCG AGGCCGATGA CGCTTTCAGT
GAGACACTGC GAACTGATCT GTCTGTGTTA CCGCCAGCGA CGACGGTGCT CAGCACAGGC
AGCGCGCTTG TGACCGACCG GTTCGAGGCG GCGATACCGG CGCCCCAGGC AAGGTGGGGA
AGCCTGGATA TCGCCGTTGC GCCCTCCCTG GACGCGCTGG CGCTTGAACA GGCGCGCGCG
CTTGCCGCAC TGGCGGATCG CCACGCGCTC GACAATGTGG CGATCATTCT GATGGCGGCA
TCACTGGCGG ATGCTCGCCA GGAAACACAG ATAGCGGTCG ATCATCTGGC GAAATTGCAG
GCAGCCGATG GCGGATGGAC ATGGAAGCGG CAGGGATCTT CGAGTCCGGT CGTTACCGCA
GCGACGCTTG AGGTGCTCGC CAGGGCGAAG GAGTCTGGTT TTGCCGTTCC GGATACAACA
CTGGAACGCG CAATCAACCT GGCATCCCGA CTGGCGAATG ATCCCGTCCT TTCGCTCGAA
ACGCGCATCT GCCTGAGTTA TGCGCTGACG CAGCTTGACG CTCCTGTCCC GCGCGAATGG
GACGAAAACG CTTTGAATGC GTCCGGGCTG GCGTGTCGCC TGTTGATGCT GCCGCCGGAT
CAGGCGCGCA TCGACCCTGC GCTTCCCCGT CTGATCAGTC TGGCGCAACG CACACAGACG
GAAGCGTGGT GGACGGCGCC AGACGGCGGC GCATTCCCGC ACGATGATGT TGCAACGACT
GCAATTGCAG CGCGTGCAGT TCACCACGCA TCACCGCGGC ATCCGCTGAC TGCTAATGCC
GCGCGCTGGC TGATCAGCCG TATGACGCCA GCGGGATGGG GCGACGCATA TACAACGGCG
CGCGTGGTGC AGGCATTGCG CGCGATTGCG CCTGCCAGCA CACCGGCGAC CGTTGCGATG
ACGCTCAACG GTGCGCCTGT CGTAGCACCT GCCGCGCCTG ACGCTGTGTT ACGGATCGTT
CCTATTCCTC TCAGCGATCT GCGCCCGGTC AACACGCTCG TGGTGACCGG CGATGGCAAC
CCGGCGCTCG TTGCCTGGCA GGTGACCTCT GCGGATCACG CAGCGCTTCC TGCGGAAGGC
GTCGGTCTGA TCCGCGAGTT TCTCGATCCG CAAACCGGCG TTCTGCTGGA TCCGGCGCGT
CTCCGGGTTG GACAACTGAT CAAAGTACGA CTGACCTGTG TTGCTCACAC CGAGCGACAT
TTTGTGACAC TGCGCGATGC GTTCCCTGCC GGATTCGTGC CGGTCGATGC TGGATCGAGT
CCGGTGTTTC GTCAAATCGA TCTGTTTTCA GACCGGATCG AACTAGCGGT CGAGGCGCTT
GCACCCGGCA TCTATCAATA CACCTATCTG GTGCGCGCGG TAACGCCGGG ATCGTATGCT
GTTCCGCCGC CGGAACTGAT CCTGCCCGGC GCTCGCGCGC TGACCGGAAC CGCCACAACG
ACCGTCGTGC AAATTGTGGC GCCGTAG
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| Protein sequence | MRFLRQVGLI WTAALLVVVL ASLALPGARF LLLPWLSDSP VVVAVSPPDG ARDVSPRTAL
IIQFNTPMNP PGVERALRIE PESDVVYAWD DSRTTLTVTP TKTLQAGMRY RVSIDETALS
RFFRPLEEPF VFTFETAPPP AVTSLWPRDG SVEVPVDTLI SVRFSRSIVP PDRLAVPELS
PAFRTDPPVS GSVVWIDPAT LLFRPDQPLR PGVRYTCSLS PDLTDQSGTP LGRAYSWSFT
TLAPTVLSVS PPPNARQVAL REPLRIVFSQ PVDRQALEAA LSVTPPMPGA LEDAVLPDGT
QVVTYTPTAE WQAGVVYTIA LPEKTADGSP LLVKPYRWSF MTAPKPALIG RFPGEGQLLP
PGGSVRLIFS TPIDAGALRD NLRVEPPVAH LRVVTNDGEA RIDAQLQAAT LYTITIPASL
SDRAGVALER DYQVRFFTAP AAPSLTLPEA NGRVIRSLPD RAIDLLTRRT NLSELRLTLY
PLDEATLLRA LSFSDAEWTS FEPARYGLSP LRFWTQPLTD PLNTVVEERV TVTLDGGAPL
PPGFYFLRIR SPERAGAGVL LAVSRVTLSF QVVGQRAIVW VTDIASTSVI SDTPLALYRQ
GTLIAVGRSD ERGVWETDLS GVNPRDLVAV ATLLPAFATP EAPVQSAPAP RLRVILATDR
SIYSPGESVA IRGFIRQEGS QAFEIPDPGQ SLDLDIQGPS GVRLRKRIVL DASGMIDATL
ALPANAPSGV YRLFTPRDER AALQFYVHPP SSPLRASITR ITQDQVVVSV RTPEDLPIAG
ATITWTIDPE PILLPVRDDF VFSRPETPLA SLSGVGVTNE QGMLTLALPS DWYHVRIQAQ
IVEAGGLAAT LDRTIYTAPA PAVGLRAATS LVGAGGQTSV EVVTLAGDQP LAAQRVQIDA
VRLNGETASD MGVSPSEWQL LSRVITTDND GRATFAVSLP EPGVYRVRAA LVGGGLASPP
TDIVLRAYQP GFTAWSEPRT SVSLVADRAR YQPGDTALLL PLAPIPEGLA LLTVQRASGD
VVTELRTVRA GEPLTLTLTP ADAPVVRVTL TSGVQSPAYR RLQVDVPVTA ITPSLLATVT
TDAQTYDPGA TAALTITVTD ARGAPVSADV LVRITAGDDD RQEPVVWRTG RTDRNGVIRF
DAPLPQTPGT HEVRVWVAGE RGFGVTGAAL QARQPIVGQI VAPQFARAGD RFVVGVRLTT
QEDVPRQTRI TMRMPDGTAV VQTTAVPTEG AALATFTVQA PSSGAAMAVQ AIVEADDAFS
ETLRTDLSVL PPATTVLSTG SALVTDRFEA AIPAPQARWG SLDIAVAPSL DALALEQARA
LAALADRHAL DNVAIILMAA SLADARQETQ IAVDHLAKLQ AADGGWTWKR QGSSSPVVTA
ATLEVLARAK ESGFAVPDTT LERAINLASR LANDPVLSLE TRICLSYALT QLDAPVPREW
DENALNASGL ACRLLMLPPD QARIDPALPR LISLAQRTQT EAWWTAPDGG AFPHDDVATT
AIAARAVHHA SPRHPLTANA ARWLISRMTP AGWGDAYTTA RVVQALRAIA PASTPATVAM
TLNGAPVVAP AAPDAVLRIV PIPLSDLRPV NTLVVTGDGN PALVAWQVTS ADHAALPAEG
VGLIREFLDP QTGVLLDPAR LRVGQLIKVR LTCVAHTERH FVTLRDAFPA GFVPVDAGSS
PVFRQIDLFS DRIELAVEAL APGIYQYTYL VRAVTPGSYA VPPPELILPG ARALTGTATT
TVVQIVAP
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