| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1093 |
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| Symbol | |
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| ID | 5208040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1359985 |
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| End bp | 1361874 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640594707 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001275451 |
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| Protein GI | 148655246 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0361636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00886374 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACACG ACAGAAAAGC ACGACTGAAC CGACGCACGT TTCTGCGCGC CGCAGCTATC
GGCATCGGGT CAGCGGCGCT TGCCGCCTGT GGCGGCGGCG GCGCAACCGC ACCAACCCAG
CCGCCAGCGA CGCTTCCCCC GCCAACGACG GCGCCAACCC TTGCGCCGGT TCAACCAACG
CCGCCGCCAA CCGCCGCCCC CGCACCAACT GCTGCACCGG CGGGCACCGT CACGAACTCG
CTCGGCGTCA CCCTGCCGGA GAACGCCGCC CCGCTCGAAC ATCAGACCTT CGTCGTCTAC
TTCGATATCA CCGCCGACTT CACCAGCCCT AACCAGATGG AAACGATCTA CAAGTCGGGA
GGCTTCGGCA GCATCACCAA CCTGACCGGC GATACCCTCG TGCGCCTGAA CAAGGACTTC
CAGGTGCAAC CGGCTGCCGC GCTCTCGTGG TCGTCCGATG AGACCGGCAA GGTCTGGACG
TTCAACCTGG ACCCCAATCT GGTCTGGAGC GATGGCACAC CGGTGACGGC AGAGGACTTT
GTGGCAACCT TCCGCTACGC TGCCGACCCG CAGCATGCCT GGGACTTCGC CTGGTACTAC
AGTGCGCCGG GAGCGATCAA GAACTGGGAC AAGTGCGTTG CTGGCGAACT GCCGCTGGAA
GAGCTTGGCG TCACAGCGAA AGATAAGCAC ACCCTGGTGA TCGAAACTGA AACGCCAGCG
CCCTTCCTGC CCGCCAAACT GGTCTACAGC GAAGTGCTCA GCGCCGCGAA ACTGAAAGAG
TACGGCTCCG GTCTCTACAC GGCAGACCCG GAGAAGACCA TTTCGTGCGG ACCGTACATT
CTGAAAGAGT TCAAGCCGCG CGAACGGGTG GTGTTCGAGA TCAACCCGAC CTACAAAGGC
ACGAACCGTC CGCGGATTGA GCGCGTCGTT CAGATTGCGG CACGCCCCGA AGCCATGTTC
GCCGGATACC AGGCGGGCGA AGTTGACCGC GTGACCGGTG AGCAACTGCA AACAGCCGAC
AACGAGATCA TCGCCAGAGA CCCCGAACTC TCGAAGCAGG TGCGTCTGAC CGCTGGCGAC
TTCCGCACCG ATTACCTCTT CTTCGACTGC CAGAATCCGC CGTTCAACGA TGTGCGCGTG
CGCCAGGCGT TCAGCCATAT CGTCGACCGC GATACGCTGA TCAAGACGAT CATCACGCCA
ACACAGGGCA TCCCGGCATA CTCCTTCCTG ATGCCCGGTT TCCCGGCATC GAACTCAGAG
GGGTTGAAGG ATATTCAGCG CTACGACCCT GAACTTGGGC GCGCACTGCT CAAGGAAGCT
GGCTACGAAG GCGGCAAAGG GTTCCCCAAA TTGACCCTGT GGCTGCGCAA TGAGCCGCAG
ATCCGCCAGG CGCTCGCCGC AGCAATTGCC GCAGCCATCA CCCAGGAGTA CGGCATCGAA
GTCGAGGTCT CAAACAAGGA CTTCAAGACC TTCATGGATG CGCTCAATGC CAAGCCGACT
CAGATCCAGT TCGGCATGGT GTCATATGGC ATCGACTTCC TCGACCCGTC GAACATGCTC
GGCGTCTGGC TCAGCACGGG TCGCCACAAC TGGTTCAACA AGAAATTCGA CGAGATGGTG
CTGTCGGCGT CGGAGAGCAC CGATCCAAAT CGTATCAAGG TGTTCCAGGA TGCGGAGCGA
TTGCTGTGCG AAGAAGCGCC AGCGGTCTTC ATCTACCACC GTACCGTCGC CGACATCTAT
AAGCCCTATG TCGTCGGTGA GTGCTTCGAG CCGAATATCG CCGGTTTCTC CGGTTTGCAG
TGGCCCGGCT TCACATCAAT GAGCGACTCG TTGCAAACCA TGTATATGAG CAACGAGGTC
ACGAAGTATC GGAAAGCGCC TCCGAGATAA
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| Protein sequence | MTHDRKARLN RRTFLRAAAI GIGSAALAAC GGGGATAPTQ PPATLPPPTT APTLAPVQPT
PPPTAAPAPT AAPAGTVTNS LGVTLPENAA PLEHQTFVVY FDITADFTSP NQMETIYKSG
GFGSITNLTG DTLVRLNKDF QVQPAAALSW SSDETGKVWT FNLDPNLVWS DGTPVTAEDF
VATFRYAADP QHAWDFAWYY SAPGAIKNWD KCVAGELPLE ELGVTAKDKH TLVIETETPA
PFLPAKLVYS EVLSAAKLKE YGSGLYTADP EKTISCGPYI LKEFKPRERV VFEINPTYKG
TNRPRIERVV QIAARPEAMF AGYQAGEVDR VTGEQLQTAD NEIIARDPEL SKQVRLTAGD
FRTDYLFFDC QNPPFNDVRV RQAFSHIVDR DTLIKTIITP TQGIPAYSFL MPGFPASNSE
GLKDIQRYDP ELGRALLKEA GYEGGKGFPK LTLWLRNEPQ IRQALAAAIA AAITQEYGIE
VEVSNKDFKT FMDALNAKPT QIQFGMVSYG IDFLDPSNML GVWLSTGRHN WFNKKFDEMV
LSASESTDPN RIKVFQDAER LLCEEAPAVF IYHRTVADIY KPYVVGECFE PNIAGFSGLQ
WPGFTSMSDS LQTMYMSNEV TKYRKAPPR
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