| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1092 |
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| Symbol | |
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| ID | 5208039 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1356259 |
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| End bp | 1359573 |
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| Gene Length | 3315 bp |
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| Protein Length | 1104 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640594706 |
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| Product | peptidase S41 |
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| Protein accession | YP_001275450 |
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| Protein GI | 148655245 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4946] Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.588085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0332466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC ACGGATATTA TCGCTGGCCA ACCATTCATG ACGACACCGT TGTCTTTGTT
TGTGAAGATG ATCTCTGGTT GGTTGCCGCA TCGGGCGGCG TGGCACGACG GTTGACCGCG
AACCCTGGCA GTGTGCAGTC GCCAGCGCTC TCCCCCGATG GTACATTGCT GGCATTTGTC
GGACGCGATG AGGGTCCGGG GGAAGTCTTT GTGATGCTGG CAGTGGGCGG TGAAGCGCGT
CGGCTGACGT TTCTCGGTGA AACAATGCGC GTATGCGGAT GGAGTCGCAA TGGGCGCGAT
ATTCTGTTTG CCAGTTCTGC GCATTCACCG TTTTCGCGAT CTCCCCTGCT GTACGCTGTC
GCTGCCGATG GCGGCGAGCC GCGCCTTCTT CCGACCGGTC CGGCGGTTCA CGTGTCGTAT
GGACCAGACG GCGGCATGGT CATCGGGCGC AATGAGAGCG ACCCGGCGCG CTGGAAGCGG
TATCGCGGCG GACGCACCGG CGATGTGTGG ATCGACCCGG ATGGCAGCGG CGAGTGGCGG
CGTCTGATCT CGCTCCCCGG CAATATCGCC ATTCCGCTGT GGGTTGGCGA CCGGATCTAT
TTTGTGTCCG ATCACGAAGG CGTCGGAAAT CTCTATTCAT GCCTGCCGAC CGGCGAGGAC
CTGCAACGCC ATACCTGGCA CCGCGAATAC TATGCGCGTT TTCCGTCCAC CGATGGACGG
CGGATCGTCT ACCATGCTGG CGCGGATCTC TACCTGTTTG ATCCGGCAAC GAATGGATCG
CGCAAGATCG AGATCGAACT GCACAGCCCG CGAACGCAGC GAAAGCGTCG TTTTGTCGAT
CCGGCGCGTT TTCTTCAAAG TGTTGCACTG CATCCGGAGG GGCACTCGCT CGTCGCCGTC
GTTCGCGGCA AGCCGTTTAC ATTCGGCAAC TGGGAAGGGG CTGTGTTGCA GTACGGCGAT
CCTGGCGCAG TGCGCTATCG CCTGGCTGAC TGGTTGCCCG ACGGCAGGCG GATTGTGGTG
GTAAGTGATG CCGCAGGCGA AGAGATGCTG GAAGTCCACC CGGTCACATT GGGCAATGGT
CAGGTCGCTC CCAGAACGGA CGTCGCGGAT GTCCAGCCTG GAACGGGATC ATCGACATTG
CTGTTTGAGG AACCGGTGCG CCTGGACGGA CTCGATATCG GTCGTCCTCT GACGCTCGCC
GTCTCACCCA AAGCGCCGCT TGTCGCGCTT GCGAATAACC GGAATGAATT GCTGCTGGTC
GATCTGAATG ATCGCTCCGT GCGGCTGCTT GATCGCAGTC GATATGCCTC TATGCCCGGC
ATCGCCTGGT CGCCAGATGG ACGCTGGCTT GCGTATGGCT TTTGGGAAAC GGAGCAGACA
TCGGTTATTA AACTGTGCGA GATCGCCACC GGGACGATCA CCCCGGTCAC GCGACCGGTG
CTGGTCGATC GATCTCCGGC GTTCGATCCA GAGGGAAAGT ATCTCTATTT TATTTCATAC
CGCGATCTCG ATCCGGTGCG TGATGATATT CATTTCGACC TGGGATTTCC CCGCGGTGCG
CGTCCATTTC TGGTGACGTT GCGCGCCGAT CTGCGTTCGC CGTTTGTGCC GGGTCCGCAT
CCGCTGGAAC GACCGACGGC GAAGCCTGCT TCAGGTGAAG CGTCGTCGGG TCAGGAAGAA
GCCACTGCTC CGAAAGAGGC GTCGTCCGAG AAAAGCGTCG TGATCGATCT CGAAGGCATC
GCCGACCGGA TTGTCGCGTT TCCCGTACCG GTTGGGCGGT ATGGGCAGAT CGCGGGGATA
CCGGGAAAGG CGCTCTTTAC TGTTTTTCCA ATCGAAGGCA TGCTGAGTCA GGCGCACATG
TCGGGCAGTG CGTCAGCGAG TCGCGGGCGT CTCGATGTCT ACGATTTCGA GACCCTGAGT
AGCGACACGT TGATCGATGG CGTCTCGCGC TTTGCCCTTT CACGCGATGC GAAGACGCTG
ATCTACCGTT CCGGCAATCG GGTGCGCGTT GTGAGAGCAG GCGAGAAACC GAAGGATAAC
AGCCCTGAGC CTGGACGGAA GAGCGGATGG ATCGATCTCG CGCGCATCAA ACTGCTGGTC
TCGCCGCCGG CGGAGTGGAG GCAGATGTAC CGCGAAGCCT GGCGTCTCCA GCGCGATCAT
TTCTGGACGC CGGATATGTC GGGAGTCAAC TGGCTGGCGG TCTATCAGCG CTACCTGCCG
TTGCTTGATC GGGTTGCAAC GCGCGGCGAA TTTTCCGATC TGCTGTGGGA GATGCAGGGC
GAACTGGGAA CATCGCATGC CTACGAATAT GGTGGTGATT ACCGTCCTGA GCCGCGCTAC
AGCCCAGGCA GACTGGGCGC AGATCTGCGC TACGACGCCG AAACCGACAG TTATGTGGTC
GAGCGAGTGA TCCGGGGTGA TGTATGGGAC GAGCGCGCCA GTTCGCCGCT GGCGCAGCCA
GGGATCAACA TCGTGCCCGG CGACCGCCTG ATCGCAGTCG GCGGGCATCG GGTCGGGCGA
AACGTATCGC CGCACGAATT GCTGATCAAC CAGGCGGGCA GCGATGTGTT GTTGACCTTT
ATGAAGATGG ACGGTACGCT TCGATCGGTG ACCGTTAAGG CGCTCTACGA CGAGAGTCGC
GCGCGCTATC GGGAATGGGT CGAACGGAAC CGGCAGATCG TCCACGACGC AACGCAGGGG
CGCGTCGGGT ATCTCCATAT CCCCGATATG CAGGCACACG GGTATGCCGA GTTCCACCGC
GGCTTTCTTG CCGGGGTGGT GTATGAAGGG TTGATCGTCG ACCTGCGGTA TAATACGGGC
GGCTTCGTTT CGCCGTTAAT CGTCGAAAAA CTGGCGCGAA AGCGCCTCGG ATACGGTGTT
TCACGCTGGG GCGAACCCGA ACCCTACCCG CCGGAGTCGG TAATGGGACC AATGGTGGCG
ATCATTAACG AAGCGGCCGG ATCCGACGGC GATATCATCA GCCACGTGTT CAAAATGATG
AAACTCGGTC CGCTGATCGG CAAGCGCACC TGGGGCGGGG TCATCGGCAT CTATCCACGC
GATACCCTGA TCGACGGCGG TGTGACCACG CAACCGGAGT TTTCCTTCTG GTCGGCGGAG
GCGGGCTGGC AACTGGAGAA TCGCGGCGTT GAACCGGATA TTGAAGTCGA AATGCGACCA
CAGGATTACG TTGCGGGCGT CGATCCGCAA CTCGAGCGCG CGATTGCCGA AGTGCTGCGC
CTGATGCAGG ATCACGCGCC CAAACTTCCC GATTTCGGCG AACGACCACG CCTGCCCTTG
CCGGAGGAAC GTTGA
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| Protein sequence | MSTHGYYRWP TIHDDTVVFV CEDDLWLVAA SGGVARRLTA NPGSVQSPAL SPDGTLLAFV
GRDEGPGEVF VMLAVGGEAR RLTFLGETMR VCGWSRNGRD ILFASSAHSP FSRSPLLYAV
AADGGEPRLL PTGPAVHVSY GPDGGMVIGR NESDPARWKR YRGGRTGDVW IDPDGSGEWR
RLISLPGNIA IPLWVGDRIY FVSDHEGVGN LYSCLPTGED LQRHTWHREY YARFPSTDGR
RIVYHAGADL YLFDPATNGS RKIEIELHSP RTQRKRRFVD PARFLQSVAL HPEGHSLVAV
VRGKPFTFGN WEGAVLQYGD PGAVRYRLAD WLPDGRRIVV VSDAAGEEML EVHPVTLGNG
QVAPRTDVAD VQPGTGSSTL LFEEPVRLDG LDIGRPLTLA VSPKAPLVAL ANNRNELLLV
DLNDRSVRLL DRSRYASMPG IAWSPDGRWL AYGFWETEQT SVIKLCEIAT GTITPVTRPV
LVDRSPAFDP EGKYLYFISY RDLDPVRDDI HFDLGFPRGA RPFLVTLRAD LRSPFVPGPH
PLERPTAKPA SGEASSGQEE ATAPKEASSE KSVVIDLEGI ADRIVAFPVP VGRYGQIAGI
PGKALFTVFP IEGMLSQAHM SGSASASRGR LDVYDFETLS SDTLIDGVSR FALSRDAKTL
IYRSGNRVRV VRAGEKPKDN SPEPGRKSGW IDLARIKLLV SPPAEWRQMY REAWRLQRDH
FWTPDMSGVN WLAVYQRYLP LLDRVATRGE FSDLLWEMQG ELGTSHAYEY GGDYRPEPRY
SPGRLGADLR YDAETDSYVV ERVIRGDVWD ERASSPLAQP GINIVPGDRL IAVGGHRVGR
NVSPHELLIN QAGSDVLLTF MKMDGTLRSV TVKALYDESR ARYREWVERN RQIVHDATQG
RVGYLHIPDM QAHGYAEFHR GFLAGVVYEG LIVDLRYNTG GFVSPLIVEK LARKRLGYGV
SRWGEPEPYP PESVMGPMVA IINEAAGSDG DIISHVFKMM KLGPLIGKRT WGGVIGIYPR
DTLIDGGVTT QPEFSFWSAE AGWQLENRGV EPDIEVEMRP QDYVAGVDPQ LERAIAEVLR
LMQDHAPKLP DFGERPRLPL PEER
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