| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1057 |
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| Symbol | |
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| ID | 5208003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1295413 |
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| End bp | 1296501 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640594671 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_001275416 |
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| Protein GI | 148655211 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase
[TIGR02088] isopropylmalate/isohomocitrate dehydrogenases |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.101264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCAG CGCCGTACAC CATTCTGGTC ATCCCCGGCG ACGGCATCGG GCGTGAAGTG
ATCCCGGCGG CGGTCGCAGT CTTGCGCGCT ACCGGCTTGC CCTTCCACTT CGAGAACGCC
GACGCCGGGT GGGAATGTTT CCAGCGCCAG GGGGAGGCGC TTCCCTCCGC TACGCTCACT
GCTGCGCGCG CCGCAGACGC GATCCTGTTC GGCGCCGTCG CCTCGCCCGG CTACCCGGTC
GCCGGGTATC GCAGCCCGAT TGTCCGGTTG CGCCGCGAAC TCGACCTGTA CGCCAATATC
CGCCCGGTTT TCGACGATCT GCCGGAGAAC GGCAGCAACC CCCGGCGGCG GAAGGTCGAT
CTCGTCGTGG TGCGCGAGAA CACGGAAGAT GTGTACGCCG GACGCGAACG GGTCGAGGAT
GATGGGGCGA CTGCGATCGC CGAGCGTGTC ATCACCCGGC GCGCCAGCGC GCGCATCATG
CGCGTCGCCT GCGACCTCGC GCGCGCCCGG CGCAGTGCGC GCAACGGATC AGACGCGCCG
CCGGGCAGGG TCACCGTCGT TCACAAAGCG AATGTGTTGC GCGAAACGTG CGGACTGTTC
CGCTCCGTCG CGCTGGAGGT CGCACAGGCA TACCCCGATC TCCAGATCGA TGAGATGCTG
GTCGATACCT GCGCACTCCA GCTCGCCACC CGCCCCGAAC GGTTCGATGT TATCGTCACC
ACCAACCTGT TCGGCGATAT TCTGTCGGAC GTTGCGTGCG CCTGGGGCGG CGGGTTGGGT
CTGGCGCCGT CGGCGAACCT GGGTGAACGG CATGCCCTGT TCGAGCCAGT GCACGGCGCA
GCGCCCGACA TTGCCGGGAA AGGGATTGCC AATCCGCTGG CGGCGATTGG ATGCACCGCG
CTGCTTCTTG ACCATCTTGC CGGTCGTGCA CCGGCAGACC TGGCTTCCGC CATGCGCGGT
TGGAGCGCAC GCATCCAGCG CGCCATTCGC CACGTGCGCG CTGCCGGTCC ACACACGCCC
GACCTGGGGG GGAGCGCAGT CACAACCGAT ATAACCAACG CAGTATTATC CCATATGCTC
ACCACATAA
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| Protein sequence | MSAAPYTILV IPGDGIGREV IPAAVAVLRA TGLPFHFENA DAGWECFQRQ GEALPSATLT
AARAADAILF GAVASPGYPV AGYRSPIVRL RRELDLYANI RPVFDDLPEN GSNPRRRKVD
LVVVRENTED VYAGRERVED DGATAIAERV ITRRASARIM RVACDLARAR RSARNGSDAP
PGRVTVVHKA NVLRETCGLF RSVALEVAQA YPDLQIDEML VDTCALQLAT RPERFDVIVT
TNLFGDILSD VACAWGGGLG LAPSANLGER HALFEPVHGA APDIAGKGIA NPLAAIGCTA
LLLDHLAGRA PADLASAMRG WSARIQRAIR HVRAAGPHTP DLGGSAVTTD ITNAVLSHML
TT
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