| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1056 |
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| Symbol | |
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| ID | 5208002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1294916 |
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| End bp | 1295416 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640594670 |
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| Product | homoaconitate hydratase small subunit |
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| Protein accession | YP_001275415 |
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| Protein GI | 148655210 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.23213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCGAA TCTGGCGTTT TGGCGCGAAT GTCAATACCG ATCAGATCGT TCCCGGTCGT
TATGCGCCCT ATATGCTGAA GAGCGAGGAA GAACTGCGCA ACTATCCGTT CATCGAGGCG
CGCCCGGAGT TTGCTTCGAC CGTGCGTCCC GGCGACCTGA TCATTGCCGG TCCGAACTTC
GGGTGCGGCT CATCGCGCGA ATACGCGCCG CTGGCGCTCA AGATGGTCGG CATCGGGGCG
ATTATCGCGC CGCTGTTTGC GCGCATTTTC TACCGCAATG CGCTCAACCT GGGCATTCCG
CTGTTCGAGG CGGATCTGAC CGGTCAACTG GAGGATGGGC AGGAGGTTGA ATTCAATGTC
GAGACCGGCG TTATCATTGC CGATGGGCGC ACCATTCAGT TGCCGCCGCC GCCCGAATGG
ATGCGCGAGG TCTGGCGCGA GGGCGGCATC GTTCCGTTCT ACCGCAAGTA TCGACGCTTC
CCCGGAGCCG TGACGGTATG A
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| Protein sequence | MARIWRFGAN VNTDQIVPGR YAPYMLKSEE ELRNYPFIEA RPEFASTVRP GDLIIAGPNF
GCGSSREYAP LALKMVGIGA IIAPLFARIF YRNALNLGIP LFEADLTGQL EDGQEVEFNV
ETGVIIADGR TIQLPPPPEW MREVWREGGI VPFYRKYRRF PGAVTV
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