Gene RoseRS_1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1055 
Symbol 
ID5208001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1293233 
End bp1294375 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content64% 
IMG OID640594669 
Productcystathionine gamma-synthase 
Protein accessionYP_001275414 
Protein GI148655209 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.804052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATCTCG AAACAATCTC CATCCATGCC GGGCAGGAGA TCGATCCGAC AACCGGATCG 
GTCATCCCGC CGATCTACCT GACAACGACC TTTGAACGCG CGCCCGACGG GAGTTTTCCG
CACGGGTACA TCTACACGCG CAATGGCAAC CCCAATCGCG CGATGCTCGA AACCTGCCTG
GCGACGCTCG AGGGCGGCGC AACCTGCGTG GCGTTCAGTT CGGGGCTTGC GGCGGCAATG
AGCATCTTTC AGGCGTTGCG TCCCGGTGAC CACGTCGTTG CGCCCGACGA TGCCTACCAC
GGGGTGACGC GATTGCTGCG CGACATCATG GCGCCGTGGG GTCTGGAGTA TACCCGCGTC
GATATGCGCG ATCCGCAGAA CGTTGCGGCT GCGCTGCGCC CGAATACGCG CCTGGTCTGG
ATCGAAACCC CTTCCAACCC GCTGCTCAAA ATTGCCGATA TTGCTGCGAT TGCGAGCATT
GCCCATCAGG CAGGCGCGCT ATGTGCGGTC GATAATACCT GGGCGACGCC GGTGCAGCAG
CGTCCGCTCG AACTCGGCGC GGATATGGTG ATGCACGCAA CAACCAAATA TATCGGCGGG
CACAGTGATG TGCTCGGCGG CGTGGTCGTT TTCCGCGAGA ACGATGCGTT TGCGGAACGG
GTGCGTTTCT TGCAGATCAA CGGCGGGGCG GTTCCGTCAC CGTTCGACTG CTGGTTGACG
CTGCGCGGCA TTCAGACGCT GACGTACCGG GTGCGCGCTC ACGCTGCCAG TGCGATGCGG
GTCGCCCGTT TCCTGGCAAC CCATCCGCGT ATCGAACGTG TCCACTATCC GGGGCTGGAA
ACCCATCCCG GTCACGCGGT CGCCGCCCGG CAGATGCGCG GTTTTGGCGG CATGATCTCG
ATTGAGGTTC AGGGTGGCGA GGCGGCGGCA ATGGCGGTCG CGGCACGGGT ACGGATTATC
ACCCGCGCCA CCAGTCTGGG CGGCGTCGAA AGCCTGATCG AACATCGCGC ATCGGTTGAA
GGACCGGAGA GCGTCACCCC GCCCAACCTG CTGCGTATCT CGGTCGGTCT CGAGCATCCT
GATGACCTGA TCGCCGACCT GGCGCAGGCG CTGGAGGTTG ATGACGTTTC GCCGCAGCGG
TGA
 
Protein sequence
MHLETISIHA GQEIDPTTGS VIPPIYLTTT FERAPDGSFP HGYIYTRNGN PNRAMLETCL 
ATLEGGATCV AFSSGLAAAM SIFQALRPGD HVVAPDDAYH GVTRLLRDIM APWGLEYTRV
DMRDPQNVAA ALRPNTRLVW IETPSNPLLK IADIAAIASI AHQAGALCAV DNTWATPVQQ
RPLELGADMV MHATTKYIGG HSDVLGGVVV FRENDAFAER VRFLQINGGA VPSPFDCWLT
LRGIQTLTYR VRAHAASAMR VARFLATHPR IERVHYPGLE THPGHAVAAR QMRGFGGMIS
IEVQGGEAAA MAVAARVRII TRATSLGGVE SLIEHRASVE GPESVTPPNL LRISVGLEHP
DDLIADLAQA LEVDDVSPQR