Gene RoseRS_1045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1045 
Symbol 
ID5207991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1284000 
End bp1284416 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content64% 
IMG OID640594659 
Productholo-acyl-carrier-protein synthase 
Protein accessionYP_001275404 
Protein GI148655199 
COG category[I] Lipid transport and metabolism 
COG ID[COG0736] Phosphopantetheinyl transferase (holo-ACP synthase) 
TIGRFAM ID[TIGR00516] holo-[acyl-carrier-protein] synthase
[TIGR00556] phosphopantethiene--protein transferase domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.935838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGTCT ACACCGGTAT CGATATTGTG GAGATAGCAC GGATCAAACG CGCAGTCGAG 
CGCTGGGGCG ACCGATTCGT GCAGCGGATC TATTCTCCCG CTGAGATTGC GCTGTGCGCC
GGGCGGATCA ATTCGCTGGC GGCGCGCTGG GCGGCAAAGG AGGCGGTCGC CAAATTGCTG
GGCGTCGGGA TGCGTGGTCC TGGCAGCAGC GCACACAGCG TTGCGTTCCG CGACATCGAG
ACGCTCACCG ACGACGACGG GCGTCCAACT GTGACGCTCA GCGGAGCGGC GCGCGCGCGC
GCCCGCGAAC TGCACATCGA GAGCATCTGT ATCAGCCTGT CGCACGATCA CGGTCTGGCA
ATTGCGGTCG CCGTCGCGTC GACTTCACCC GCAGCCAGAA GGAGGATGCC ATGGTAA
 
Protein sequence
MTVYTGIDIV EIARIKRAVE RWGDRFVQRI YSPAEIALCA GRINSLAARW AAKEAVAKLL 
GVGMRGPGSS AHSVAFRDIE TLTDDDGRPT VTLSGAARAR ARELHIESIC ISLSHDHGLA
IAVAVASTSP AARRRMPW