| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1037 |
|---|
| Symbol | |
|---|
| ID | 5207983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 1274236 |
|---|
| End bp | 1276044 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640594651 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001275396 |
|---|
| Protein GI | 148655191 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCCT CGTCGCCGCT CATCGCATTG GTTGGGTTAT TTCTGGCGCT GTGTGTGGTG
TACAACGCCG TGACGCCGCT CGGTGAGGGA CCGGACGAGC CGGGGCATGC GGCGTATGTG
TTCTTTCTGG CGCGCGAGGG GCGTCTGCCG GTGCAATGTT CGCCGCCCTG CGCCAGTGAT
GTGCCAGGAT CGGGGCATCA TCCGCCGCTT GCATATCTGC TGGCGATGCC TGCGGCGCTC
TGGTTGCCGC CAACGCTGCG TACCTTCGAT CTGCCCGGTA ATCCACGCTT TACCTGGGCA
GGCGGCGATC AGGTGAACGC GGTGGCGCAC GGGAGCCGCG AACAGTGGCC CTGGGACGCA
CAGGTGTGGT CCTGGCGATT GGCGCGCCTG GCGTCGAGTC TGGCCGGCGC GGCGACGATC
ATCTTTACCT GTCTGGCGGC GGATGCGCTG CATCGTCGCC TGAACAACGA TCCGGCGCGT
GGGAACAGCG ACCAGAAGGC GCTGCTGGCA GCCGCACTGG TTGCGTTCAA CCCGCAGTTC
ATCTTCACAT CGTCGCTGGT GACGAATGAT GCGCTGCTGG CGGCGCTCGG CGCGGCGCTT
CTCTGGCTGT TCATCAGCAG TCCGCGGTCG CTGCCGCATA CGGCGCTGAT CGGAACGATC
CTGGGAATGG CGCTGATCAC CAAACAGAGT GCGCTGCTCT TTCTACCGCT TGCGCTTGCC
TGGTGCGCAA CCGGCGGCGT CCGGCAACGA TGCGCAGCCG CGATCCCGGT TCCTGCTGCG
CTGCTGGTGG TTACTGGCGT CGCAGGACTG GTTGGCGGTT GGTGGTATGT GCGCAACTGG
ATTCTGTACG GCGATCCGCT CGGTTTGCAG GCGTTTCGGG TGGAGTTCAC AACGCAGGCG
TTCGAGGTGA CCAACCCGGC AGCCTGGACA GGTGCGCTGA CGACCCTGCA TGAATCGTTC
TGGGCGCGCT TCGGCTGGAT GAACCTGCCA GCGCCAGCAT GGACGATGCT GGTCTATACG
CTGGTGATCG CGGCAGCGGC TGCCGGGTGG ATACGACGTT CGATCCGACC GCACCAGATA
ACGTGCGCAT GGAACTGGCA GCTTGCGGCG TTGCCGCTGC TGGCGTTCCT GTGGGTGGTG
AGTTTCGCTC TGACCGCCGG GCTGGTTGCC TGGCAGGGAC GGATGCTCTT TCCTGCGCTG
GCAGCGATTG CGATCCTGAT TGCGTGTGGT CTGGGAGTGT GGATCCGTGG CCGTGTACTG
ACGCTCACGA TCATTATCGG AATGGCGGGA CTGGCCGCCT GGCTGCCGTT CGGTGTCATT
CAACCGGCGT ATCCACGGCA GACCCTTGCG GCAGAAGCGG CGCGCAACTG GGAAGGTATC
GACACCTATG CGCGGTTTGC CCGTTCGACC GAACCCGGTG CCGTCATTCG CCGCTGGCGG
ATCGACGGAA CGCCGCGCCC TGGCGCAACC ATCGAAGTGG CGCTGCTGTG GCACGCACGC
TCACGCCAGG ATCGCGACTG GTGGACATTC GTTCACCTGG TCGATGACAA CCGACGGATT
GTCGCCGAGG ATAACCGCGA ACCACGCGAC GGCGCGTACC CGATGTCGCA ATGGGTTGCT
GGCGATTGGG TGGAGGCGCG CTACACGCTC GCCATTCCCG CCGATCTGCC GCCCGGATCA
TATGCGCTCT GGGTTGGGTT GTGGGACCCG GCGACCGGAC GGCGCGCTGC GTTCTTCGAT
GATGATAATG TCTACGACCC TGATAGTGAT CATGTCGTGC TCACCACACT GGTTATCACC
GGACAATAA
|
|---|
| Protein sequence | MNASSPLIAL VGLFLALCVV YNAVTPLGEG PDEPGHAAYV FFLAREGRLP VQCSPPCASD
VPGSGHHPPL AYLLAMPAAL WLPPTLRTFD LPGNPRFTWA GGDQVNAVAH GSREQWPWDA
QVWSWRLARL ASSLAGAATI IFTCLAADAL HRRLNNDPAR GNSDQKALLA AALVAFNPQF
IFTSSLVTND ALLAALGAAL LWLFISSPRS LPHTALIGTI LGMALITKQS ALLFLPLALA
WCATGGVRQR CAAAIPVPAA LLVVTGVAGL VGGWWYVRNW ILYGDPLGLQ AFRVEFTTQA
FEVTNPAAWT GALTTLHESF WARFGWMNLP APAWTMLVYT LVIAAAAAGW IRRSIRPHQI
TCAWNWQLAA LPLLAFLWVV SFALTAGLVA WQGRMLFPAL AAIAILIACG LGVWIRGRVL
TLTIIIGMAG LAAWLPFGVI QPAYPRQTLA AEAARNWEGI DTYARFARST EPGAVIRRWR
IDGTPRPGAT IEVALLWHAR SRQDRDWWTF VHLVDDNRRI VAEDNREPRD GAYPMSQWVA
GDWVEARYTL AIPADLPPGS YALWVGLWDP ATGRRAAFFD DDNVYDPDSD HVVLTTLVIT
GQ
|
|---|
| |