| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1019 |
|---|
| Symbol | |
|---|
| ID | 5207965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1252103 |
|---|
| End bp | 1254082 |
|---|
| Gene Length | 1980 bp |
|---|
| Protein Length | 659 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640594633 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001275378 |
|---|
| Protein GI | 148655173 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4995] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.172565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGTG AAGAGACTAT AGCCGCGCTG GCAGCTATTT GGGACGAATG TTCATCCAGT
GCGCGCTGGC CCGCATTACT GCCGGAGCTG CGCCAACTGG TCGATCAGTT TCAACAGAGC
GCCGATGAAG ACACTCGCGC AGAAATCGCT ATGCGCATTA CCGACCTGCT GCTCGATACC
GATCCCGATC TCTACCAGAA GCTGATTACG ATGCGCAAAG CCATGCGCGC TGGCGAGGCA
CATAACCGCT TCAGCACGCG CGGCATGCCA TCTGACGCTG AACTCTCGGC AGCCTGGCAA
GAGATTCGGA CACGTGAAGC GTCAATCCAC GGCGAGAGCA TTACCACTGG CAACATCACC
GGCACCGGCA TTGCCATCGG TCAGGGCGCG CAGGCCACAG TGCATCAACA CTTCTACGAG
CCGCGCTTTA CCCGCCACAC CGACATCTCC TGCCCGCGAC GGGCGCAGGT GAACAGCCGG
GTCACCGTCA CCGTTGCGCT GACGATGCAG CCCCAGCCGG AGAGCGTCGC GTGCGAGGCT
ATCGAGGTCT TCGAGGGCAA GGTCAAAGTA CGGATCGATG CGCCCGGCTT TGAACCGCTG
AGTCCGCTCG AACAAACAAT CATTGTCGAG CGGGATGACG ATAGCGCCCC GGTCGTGTTT
CACCTCAAGG CGCGCGAAAC CGGTCCCCAC GAGATCGCCA TCCAGTTCTG GCAGCGCGGC
AATCTCATCG CCACGGTCGT GGCGCCCATT GAGGTGCTAG AGGTAGAGCC GGTCTTTGCG
CCAGCATTAA TACCGAAAAC GCCCGTCAGT CCGCGCATGG CTGACGTAAC ACCGCCAGAC
CTCACCCTCG TCGTCTTTCG CGACCCTGCC GGGCGGATGC AGTTCACGCT GCACCGTGAC
AACGTTACGC TCTGCTACGC CGAACAGACG CTGCGCCATC CCCCCGACGC GCTGCTCAAT
GCGCTCTTTG ACGAGTTACA CCTGCTGCAA CGCGGTACCG ACAGCGCTAA CCGACGGCGT
GGTTCGTCGC TCCTGACTGC CGAACAGGTC GAGCGGCGCA TCCGCAATCT GGGCTACAAA
CTGTGGGATG ACCTGATCCC ACCCGAACTC AAACTATACT ATGCCCGCGA GCGCCACCAG
TGGCAGAGCG CCATCGCAGC CGGGCAACGC TGGAGCCTGC TGGTGCAATC GAACGAGCCG
GACATCCCCT GGGAGCTGGT GCGTCCGTAC AGCGATGGGC CGGATTGCTG GGAAGAGGAC
TTCTGGTGCC AGACCTTCCA CTTCGCCCGC TGGCTGCTCA AGCGCCCCGA CAGCCCTGAG
AGCGTGGTTC CCCTACCGCG ACTGCGGCTG CGCACCCTGG CCGCAGTCGT GCCTACCTGC
TACCCGGAAC TGAAGGCTGT CCCTGAAGAA CACAAACTGC TGCGCGACCT GATTGCCCGC
TATTGCCTGA CCGACCGCAG CCCGCAGCGG GCAACCGAGG CAGAGGTCAT CGCTTTGCTC
GAAACGGGTG GCTTCGACTG GCTGCACGTC ATCACCCACG GCGACTTCTT CGCTCAATCG
GCGTTGCACA GCAGCGCAAT CGGCCTGGAT GACAACCAGT GGCTGGCGAG CAGCGCGATC
ACTGGTCTGC GCATCCGGAG CGCGCTACGC AACCACCGCC CGGCGATCAT CCTGAACGCC
TGTCACGTCG GTCGTGAGCA ACCTTCGCTC AGCGGCGCTG CCGGCTGGGT CACGCAGTTT
GTCGGCTCCG GTGCGGGCAT GATGATCGCG CCGCTCTGGT CGGTCAACGA CGAGTTTGCT
TTCCGCTTTA GCGAAGTCTT CTACACCGCG CTGCTCAACC CTGATCGCCC TGCCACCGTC
GCTGAGGCAA TGTGGCAGGC GCGCAACGCC ATCCGTCAGC CCGACGATCC GACCTGGCTC
GCCTACAGCC TGTTCGCCCA CCCGAATGCG CGGGTCGAAG TGCAACCGTT GCAGGCGTAG
|
|---|
| Protein sequence | MAGEETIAAL AAIWDECSSS ARWPALLPEL RQLVDQFQQS ADEDTRAEIA MRITDLLLDT
DPDLYQKLIT MRKAMRAGEA HNRFSTRGMP SDAELSAAWQ EIRTREASIH GESITTGNIT
GTGIAIGQGA QATVHQHFYE PRFTRHTDIS CPRRAQVNSR VTVTVALTMQ PQPESVACEA
IEVFEGKVKV RIDAPGFEPL SPLEQTIIVE RDDDSAPVVF HLKARETGPH EIAIQFWQRG
NLIATVVAPI EVLEVEPVFA PALIPKTPVS PRMADVTPPD LTLVVFRDPA GRMQFTLHRD
NVTLCYAEQT LRHPPDALLN ALFDELHLLQ RGTDSANRRR GSSLLTAEQV ERRIRNLGYK
LWDDLIPPEL KLYYARERHQ WQSAIAAGQR WSLLVQSNEP DIPWELVRPY SDGPDCWEED
FWCQTFHFAR WLLKRPDSPE SVVPLPRLRL RTLAAVVPTC YPELKAVPEE HKLLRDLIAR
YCLTDRSPQR ATEAEVIALL ETGGFDWLHV ITHGDFFAQS ALHSSAIGLD DNQWLASSAI
TGLRIRSALR NHRPAIILNA CHVGREQPSL SGAAGWVTQF VGSGAGMMIA PLWSVNDEFA
FRFSEVFYTA LLNPDRPATV AEAMWQARNA IRQPDDPTWL AYSLFAHPNA RVEVQPLQA
|
|---|
| |