| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_1015 |
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| Symbol | |
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| ID | 5207961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1242622 |
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| End bp | 1246272 |
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| Gene Length | 3651 bp |
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| Protein Length | 1216 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640594629 |
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| Product | SARP family transcriptional regulator |
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| Protein accession | YP_001275374 |
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| Protein GI | 148655169 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAGCG CAAGACGACA AAAGCGATGT CTGAACAGGT ATAATACCAT CACACGCAGA
GTATCCGGTT CAATCCGCCC GAATCGCAAA CGCATCGTCA TGATCGGTCC GCATCATCCA
CATCCATCGC TCGAACTCCG GGTTTTCGGC ACGCCGCGCC TTTTGCTCGA CCAGCACGAC
GTGCCGTTCC GCCGGCGACA ACCGCTGGCA ATTATGGCTG TGCTGGCGCT CAGCGAACGT
TCCGTCACCC GCGATGAACT GACGTACCTG TTGTGGCCCG ACTCGCCGCA GACCGTCGGA
CGTCAACGGT TACGCCGTTT ACTCTCACAA CTGCGTCAGT CGGTCGGTCC GCTGGCTGAC
CGGTTGTTGA CCGGTGAAGC CGGGATCGGC AGTGGCGTCA TTCGTTTCGA TGCCAGTATG
TGCCGGGTCG ATGCCCGTGA GTTCGTGCGC TTATCCGGTC AGGCGCGCAC ATTGCCCGAT
CCGGACGGCT TACGCGCTGC CGAGCAGGCG ACGCGACTCT ATGCCGGACC GCTGCTGAGC
GGTCTGGAAC TCGAAGAGTC GCCGGAGTTC GAACACTGGC TCCTCCAGCA GCGCGAACGC
TTCGAGCGCA TGATCCTCGA TATCTGGCGG CGTCTCGTCG ATGGATACGC CAGCACAGGC
GATTTTGACC GCGCTATTGC TGCGGTTGAA CATGCGCTCG TTCTCGATCC GCTCTCTGAA
ATGCTGCACC GCAAGGCGAT ATGGCTCTAT GCAAAAACCG GTCGTCGCAG TGACGCCATT
CGGCAGTTTA CCGTCTGTGT TGCGTTGCTC GAACGCGAAC TGGCGCTTGA GCCGGACGCA
GACACTGCGG CGCTCTATCG GGCTATTCTG AATAACCAGC TCGATACTGC GCGGTCGCTG
GCATTCCGGG ATCAGTCGCT TCCATCCGCC ATCCGCAGTT CCACCGGTCG TGCGGAACAT
ACCTCGCCAG CGACACTCAC GACGACGTTG ACAGCAGATC TGGTCGCGGC CATGCGCACC
GCGCTCACCG GATCGTCGCC GGTTGTCGTT GTGGAGGGAC CGGCTGGCAG CGGGAAAACG
CGCATGGTTC GCCAGGCGCT GGATCAGATT CGACAGACAA CGACCAATCT TCTGGTCTGG
CTATCCGGTG CACGGCGATC AGGTCAGCAA CGCCCCTTTG GCGTCATGAT CGACCTGCTC
GATACGGCGC TGCGCGAGCG ATTGAACCAT CCTGACGCAG AGCGTGCTTT GCCGACCGAC
GTGCGGATGA CTGAGGCCGT CCGCGTGCTG CCGGAGTTGC GCGCCGTTTT CCTCCGATTG
CAACCCATTC GCCAGCCCAC AGAAGAATCA CCATCGTCCC ACCACCTCTT GCAGCGGCGG
TTGTTGCAGG CGCTGCCACG CGCCGTCCAT GCGCTGGCAG GCGGAGAGCC GGTTATCGTG
GCGCTGGAAG ACCTGGATCA GGCCGATCCA CTCTCGATAG AAGCCGTCGC CTGGCTGGCG
CGTTCGCTGC ACGGAACGAA TCTGGCGCTG GTGATCACGT GTCGCACCGC AGAGGGCGCC
CTCAACGCGA TGCTCTCCGA TCTGCGCGCA CGCGGCATGC TGCAATCGTT GACGCTGACT
GCATTCGATC ACCCGACAGT CATCGGTCTG GCGCAGCATG CCGGTCTGCC GACGACGACG
GCTGAACAGA TCTGGCGGCA GACGGGCGGT GCGCCGCTGG CAACCCGCGA GATGGTGCGT
GCGATGGTTG CTGCCGGAAA AGACCTTTCC GCACTTCCTT TGTCACTGCA CGAAGCCATT
CAGATTCAGT TGAAATCGCT TGCCCCGACC ATCCGCCAGG TTATGGAAGC AGCAGCGGTG
CTGCAAAGCG GTGATGCGCT TGAGATTCAG CAGGTCAGCG GACGCACCGC CGACGAGGTG
GAACACGCCT GTGAGGAACT TCAGGCACGC GACTGGCTCA CGTTTGACGG ATCACGGTAC
GTCGTCGCGC ATCCAGAGGT GCGGGAAGCA GTGCTGGAAA GCCTGAGTCC GGCGCGTCGC
CAGCGGCTGC ACCGTCAGGC TGCGTTGGTG ATGCGTCAGC ACAACGCGGA CCCTGCGCGA
ATTGCATCCC ATCTTGAGTC CGCCGATCAA CCAGATGAGG CAGCCGCGAT GTGGCTTCAG
GCGGCGCGGC GCGCCCGGTC GCTCTATGCG CGCGATGCTG CACTCACGGC GCTTCAGTGT
GGTCTGGGGC TGGTTCGTGA TCGACACGTG CTGTTCGAAT TGTTGAGCGA ACAGGAATCA
ATTCTGCACG AACACGGGTT GCGCGATGAA CAACGCGCGA CGCTGGAGAC ACTGGAGCGT
TTCGTCGAAC AGTCACCCGA TCACCCCGAC TGGCGCGCCG AAGTCTATCG CAAACGCGGG
CGTCTTGCCC TTGCGTGCAA CGAGTGGAAT GCCGCTATCG ATGCGCTGCG TCGAGCGGCA
GTGTTCACAC TTCACAGCGA CTGGGCAACG TTGTGTCTGC TGGCGCGCGC CCTCGGACAC
AACCAGCAGT GGCACGAAGC GGACGAGATA CTCCAACGCG CGCTGGCGCT GGCACAGCAG
CAGCGTGATC GTGAAGCGCA GGCGCGCTGC TGGCTGACCC GCGCCGACAT CGAGCAGGGA
CGGGAGCGTT TCGACGCTGC CGAAAGCGCC TTGAAGCACG CCGTGCACCT GATCGAACCC
TCATCACCAA CATTGCCGCA ACTGATGTTG AACCTTGGGA ATATGGCTAC CGTGCGCAAC
GATTTCGTCA GTGCGCTGAC GTATGGACAG GAGGCGCAAC GTCTGTTTGC GCAGCGGGGC
GCGCCCGATA GCGAAGCCGC CGCCTGGGTG CTGGTCGCCC GGATGCACGC CCGCCTGGGG
CAGTTTGAAG CGGCATTCGA AGCGTACCAG TCCGCCTATG CGGGGTATGC TGCGCTCGAA
CTGCGCCAGG GTATGGCAGC CGCTCGTATC AATGCGTGCA CCCTGGCGTT GCGCATTGGC
AATTTTGACA ACGGGTTGCG CCTGGCAGAG GAAGCCTGGG AACTGTTCCA GGCGATCAAC
GATGCGCGTG GCATGTGTGT CACCGCCAGC AACAGGGGTG CGGCGCTGGT CTGGATGGGA
CGCGGCGCCG AAGCCGAGCC ATGGCTGCGC GAGTCGTATG AGCGTGCGGT TGCGATTCCG
CTGCCTGCGC AACAGGCGGC AGCGCTGGCG AACCTGGGCG CGGCGCTGCT CCAGCAGGGA
CGGCTGGAAG AAGCCCGTCG GTTGATGGAA CAGGGACTGG CGTTGCGCGT CGCGCAGGGG
CATATCGATG TGAGTGTCGA CCGCGCATTT CTGGCGATAG CCTGCCTGCG TCTTGGCGAC
ATCGAGGCTG CTGACCGGTA TAGCCTGGAG GCTGTGGAGT ACCTGGCGCG AGCGCCACAG
GTAGAAAACC CACAGCAGGT CTGGTTTGCA CGTGCTCAGG TCCTCCGCGC TCAGGGTTTG
ATAACCGAAG CTAACAATGC TTTGCAGTCC GCCGTGGAAT GTCTATACCG CAGCGAGCAA
CAACTGCCGC CACCGTACCG CGAACGCTAC CGCAGCGTGT TTTCGTTCAA TCGTGCGATC
CTGCATGCCT TCGATAATGG CGTCTGGCCC GAACCGCCGA TGCTGGTGTG A
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| Protein sequence | MHSARRQKRC LNRYNTITRR VSGSIRPNRK RIVMIGPHHP HPSLELRVFG TPRLLLDQHD
VPFRRRQPLA IMAVLALSER SVTRDELTYL LWPDSPQTVG RQRLRRLLSQ LRQSVGPLAD
RLLTGEAGIG SGVIRFDASM CRVDAREFVR LSGQARTLPD PDGLRAAEQA TRLYAGPLLS
GLELEESPEF EHWLLQQRER FERMILDIWR RLVDGYASTG DFDRAIAAVE HALVLDPLSE
MLHRKAIWLY AKTGRRSDAI RQFTVCVALL ERELALEPDA DTAALYRAIL NNQLDTARSL
AFRDQSLPSA IRSSTGRAEH TSPATLTTTL TADLVAAMRT ALTGSSPVVV VEGPAGSGKT
RMVRQALDQI RQTTTNLLVW LSGARRSGQQ RPFGVMIDLL DTALRERLNH PDAERALPTD
VRMTEAVRVL PELRAVFLRL QPIRQPTEES PSSHHLLQRR LLQALPRAVH ALAGGEPVIV
ALEDLDQADP LSIEAVAWLA RSLHGTNLAL VITCRTAEGA LNAMLSDLRA RGMLQSLTLT
AFDHPTVIGL AQHAGLPTTT AEQIWRQTGG APLATREMVR AMVAAGKDLS ALPLSLHEAI
QIQLKSLAPT IRQVMEAAAV LQSGDALEIQ QVSGRTADEV EHACEELQAR DWLTFDGSRY
VVAHPEVREA VLESLSPARR QRLHRQAALV MRQHNADPAR IASHLESADQ PDEAAAMWLQ
AARRARSLYA RDAALTALQC GLGLVRDRHV LFELLSEQES ILHEHGLRDE QRATLETLER
FVEQSPDHPD WRAEVYRKRG RLALACNEWN AAIDALRRAA VFTLHSDWAT LCLLARALGH
NQQWHEADEI LQRALALAQQ QRDREAQARC WLTRADIEQG RERFDAAESA LKHAVHLIEP
SSPTLPQLML NLGNMATVRN DFVSALTYGQ EAQRLFAQRG APDSEAAAWV LVARMHARLG
QFEAAFEAYQ SAYAGYAALE LRQGMAAARI NACTLALRIG NFDNGLRLAE EAWELFQAIN
DARGMCVTAS NRGAALVWMG RGAEAEPWLR ESYERAVAIP LPAQQAAALA NLGAALLQQG
RLEEARRLME QGLALRVAQG HIDVSVDRAF LAIACLRLGD IEAADRYSLE AVEYLARAPQ
VENPQQVWFA RAQVLRAQGL ITEANNALQS AVECLYRSEQ QLPPPYRERY RSVFSFNRAI
LHAFDNGVWP EPPMLV
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