Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1014 |
Symbol | |
ID | 5207960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1241858 |
End bp | 1242502 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640594628 |
Product | ribonuclease H |
Protein accession | YP_001275373 |
Protein GI | 148655168 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.733459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAGA TTTTTACCGA TGGCGCCTGC CGTGGCAATC CCGGTCCCGG CGGCTGGGCG GCGGTCATCG TTCAGAACGG CGAGGTGATC GAAATCGGCG GCGCTGAGGA GCGGACGACA AATAACCGCA TGGAACTGCG CGCCGCAGTC GAGGCGTTGC GGCGGGTTCC GCCCAATGCG CCGGTGCGCC TGACGACCGA TAGCGAGTAC CTGCTGCACG GCGCGACTCA CTGGCTTCTG TTGTGGAAAA AGCGCAACTG GCTCACCACT GAACAAACGC CGGTCGAACA TCGCGATCTC TGGGAAGAAC TGGATGCGCT CGCCGATCAG CGTGTCACGT GGCAGTACGT GCGCGGGCAT AGCGGCGATC CATGGAACGA ACGCGCCAAC ACGCTGGCTC AGGCGTATGC CGATGGACGT GCGACAGGTC GGTCCCAGGG GAAGGCACGC AGACACATGT CGTACCTGAG CCTGGTGCAT GGCGTGCTGG CGCGCCATGC GACCTGGGAA GAGTGCCGCG CGCGGGTGCA TGGCGTCTCT GGCGCGCGCT GGAAGAAATG CGCCTCACCG GAAGAAGAGC GCGAGACCGT CATCCGCTGG GGGATGCCGG TCGAAGCGCT CGAGGAGTTG GATGCCGGGG AGTAG
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Protein sequence | MIEIFTDGAC RGNPGPGGWA AVIVQNGEVI EIGGAEERTT NNRMELRAAV EALRRVPPNA PVRLTTDSEY LLHGATHWLL LWKKRNWLTT EQTPVEHRDL WEELDALADQ RVTWQYVRGH SGDPWNERAN TLAQAYADGR ATGRSQGKAR RHMSYLSLVH GVLARHATWE ECRARVHGVS GARWKKCASP EEERETVIRW GMPVEALEEL DAGE
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