Gene RoseRS_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1014 
Symbol 
ID5207960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1241858 
End bp1242502 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content65% 
IMG OID640594628 
Productribonuclease H 
Protein accessionYP_001275373 
Protein GI148655168 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.733459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGA TTTTTACCGA TGGCGCCTGC CGTGGCAATC CCGGTCCCGG CGGCTGGGCG 
GCGGTCATCG TTCAGAACGG CGAGGTGATC GAAATCGGCG GCGCTGAGGA GCGGACGACA
AATAACCGCA TGGAACTGCG CGCCGCAGTC GAGGCGTTGC GGCGGGTTCC GCCCAATGCG
CCGGTGCGCC TGACGACCGA TAGCGAGTAC CTGCTGCACG GCGCGACTCA CTGGCTTCTG
TTGTGGAAAA AGCGCAACTG GCTCACCACT GAACAAACGC CGGTCGAACA TCGCGATCTC
TGGGAAGAAC TGGATGCGCT CGCCGATCAG CGTGTCACGT GGCAGTACGT GCGCGGGCAT
AGCGGCGATC CATGGAACGA ACGCGCCAAC ACGCTGGCTC AGGCGTATGC CGATGGACGT
GCGACAGGTC GGTCCCAGGG GAAGGCACGC AGACACATGT CGTACCTGAG CCTGGTGCAT
GGCGTGCTGG CGCGCCATGC GACCTGGGAA GAGTGCCGCG CGCGGGTGCA TGGCGTCTCT
GGCGCGCGCT GGAAGAAATG CGCCTCACCG GAAGAAGAGC GCGAGACCGT CATCCGCTGG
GGGATGCCGG TCGAAGCGCT CGAGGAGTTG GATGCCGGGG AGTAG
 
Protein sequence
MIEIFTDGAC RGNPGPGGWA AVIVQNGEVI EIGGAEERTT NNRMELRAAV EALRRVPPNA 
PVRLTTDSEY LLHGATHWLL LWKKRNWLTT EQTPVEHRDL WEELDALADQ RVTWQYVRGH
SGDPWNERAN TLAQAYADGR ATGRSQGKAR RHMSYLSLVH GVLARHATWE ECRARVHGVS
GARWKKCASP EEERETVIRW GMPVEALEEL DAGE