Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_1007 |
Symbol | |
ID | 5207953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 1232784 |
End bp | 1234349 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640594621 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001275366 |
Protein GI | 148655161 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0317729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAATC TCGCCATCTT GCTGGAGGAG AGCGCTCGCC GCACGCCTGG AAAGACCGCC GTCATCCTCG ATAGCATCCG CCTGAACTAT GCCGAACTGA ACGGCGCCGC CTGCAAAATC GCCAATGGTC TGACGAAACT CGGTGTTCGT CCTGGCGACA AGGTTGCGAT CATGCTCCCC AACACGCCGC ACTTCGTCAT GTGCTACTAC GGCATCCTGA AGGCAGGAGC GACCGTCGTG CCGCTGAATG TGCTGTTCAA GCGCCACGAG GTCGAGTATC ATCTAGAGGA TAGCGATTCG GTAGCGTTGA TTGTCTGGGA AGGTTTTCTC GACGAAGCGG CGTATGGTTT TCGCATGGCT GAAACCTGTC GTCATCTGAT CGTCGCACAG GCGCCCGGTT CAACTGCAAC CCTCCCGGAT GGCGCGATTC CACTTGGCAA CATCCTTGCC GAAAATCCGC ACGTCTTCGA CACCATCCAG ACGATGCCGG ACGACACGGC GGTCATTCTG TACACCAGCG GCACCACCGG CCGTCCGAAG GGCGCCGAAC TGACCCACGC CAACATGTTC CTCAATGCGA CGATCTGCGC CGATAAGTTG CTCGATATCT CATCCGATTC GGTGGGCCTG GCAGTGTTGC CGTTATTCCA CAGTTTCGGG CAGACGTGTG TGATGAACAC GCTGCTCTAC CTTGGCGGAA CAATCACGTT GCTGCCGCGC TTCGAGCCGC AGAAGGCGCT GGAGGTGATG GCGCGCGACC GGGTGACCTA TTTTGCCGGT GTGCCAACGA TGTACTTCTA CCTGCTCAAT TTCCCGAATG CGGATCAGTA CGATCTGTCA GCGCTCAGGT TCTGCGTGTC GGGTGGCGCA GCGATGCCGG TGGAGGTGAT GCACGCCTTC AACCGCAAAT ACAACGTCAC CATTCTCGAA GGGTATGGTC TCTCCGAAAC CTCGCCGGTT GCATCGTTCA ACCACCTCGA CCGGGAGCCG AAGCCTGGTT CGATCGGCAT TCCGATCTGG GGCATCGAGA TGCGCGTGGT GGACAGCGAA GGGCGTGAGG TTCCCAACGG CGAGTTGGGG GAGATCGTCA TTCGCGGTCA TAATGTGATG AAAGGGTACT ACAAGCGCCC CGACGCCACC GCCGACGCGA TCCGCAACGG CTGGTTCTAC AGCGGCGACA TTGCGTACCG CGACGATGAC GGGTTCTTCT TTATCAAAGA CCGCGTGAAA GATATGATCA TCCGCGGCGG CTTCAATGTC TATCCGCGTG AGATCGAAGA GGTGCTCTAC GGGCATCCCG CTATTGCCGA AGCGGCGGTG ATCGGCGTGC CCGATCCGGC GCTCGGCGAA GAGGTGAAGG CAGTGGTGGC GTTCAAACCG GGGCAAACCG CCACCGAGGC TGAGATCATC GAATACTGCA AAGAACGCCT GGCAGCCTAC AAGTATCCGC GCTTCGTCGA AATCCGCGAT ACGCTGCCCA AGACGGCAAC CGGAAAGATC CTCAAACGTG AACTTCGCCA GGTTGATACC GGTGTGAGTC AGATGGAAGC GACCGCCAGC GCATAG
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Protein sequence | MLNLAILLEE SARRTPGKTA VILDSIRLNY AELNGAACKI ANGLTKLGVR PGDKVAIMLP NTPHFVMCYY GILKAGATVV PLNVLFKRHE VEYHLEDSDS VALIVWEGFL DEAAYGFRMA ETCRHLIVAQ APGSTATLPD GAIPLGNILA ENPHVFDTIQ TMPDDTAVIL YTSGTTGRPK GAELTHANMF LNATICADKL LDISSDSVGL AVLPLFHSFG QTCVMNTLLY LGGTITLLPR FEPQKALEVM ARDRVTYFAG VPTMYFYLLN FPNADQYDLS ALRFCVSGGA AMPVEVMHAF NRKYNVTILE GYGLSETSPV ASFNHLDREP KPGSIGIPIW GIEMRVVDSE GREVPNGELG EIVIRGHNVM KGYYKRPDAT ADAIRNGWFY SGDIAYRDDD GFFFIKDRVK DMIIRGGFNV YPREIEEVLY GHPAIAEAAV IGVPDPALGE EVKAVVAFKP GQTATEAEII EYCKERLAAY KYPRFVEIRD TLPKTATGKI LKRELRQVDT GVSQMEATAS A
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