Gene RoseRS_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_1000 
Symbol 
ID5207946 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1225776 
End bp1226324 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content63% 
IMG OID640594614 
Productputative CheW protein 
Protein accessionYP_001275359 
Protein GI148655154 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACCA ACGATCTGCG AACGTTTCAG TCACAACCCG AACTGCGCGC TATCCTCGAA 
GAGCGCGCGC GTGCGCTTGC AGCGCACGAT GTCACCGACA CGGCAACCGG CGGCGAGGTG
ATGATCCGTT TTCGTCTGGG TGACGAGCGA TATGCGCTTC CGGCGCGTTA CGCGCGCGAG
GTGCAACCGC TGCGCGCATA CACGCCGTTG TTCCGCGCGC CGCCGTTCAT CGTCGGGCTG
GTCAACATCC ACGGGCGTCT GCTGACCTGT CTCGATCTGC GTCCACTGCT CGATCTGCCG
GTCGATCCGC CTTCTCCCGG CTCGTTCCTG ATCGTGCTCC AGGGGACAGG CGGCGATGCA
GTGCTGCTGG CGGACAGCAT TCTGGATATG ACATCAGATA CGCCTGAACT CAGCCCTGCA
CCCGTCACGA CTGCAAACGC CGCCATCTCG TGGATCCGTG GCGTGGACCG CGATCTGTCC
ATCGTGATCG ACCCGGTTGC ACTGCTCGCC GATCCGCGTC TGATCGTCGA CCATCAGGCG
GTCGCCTGA
 
Protein sequence
MNTNDLRTFQ SQPELRAILE ERARALAAHD VTDTATGGEV MIRFRLGDER YALPARYARE 
VQPLRAYTPL FRAPPFIVGL VNIHGRLLTC LDLRPLLDLP VDPPSPGSFL IVLQGTGGDA
VLLADSILDM TSDTPELSPA PVTTANAAIS WIRGVDRDLS IVIDPVALLA DPRLIVDHQA
VA