| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0998 |
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| Symbol | |
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| ID | 5207944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 1221486 |
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| End bp | 1223837 |
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| Gene Length | 2352 bp |
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| Protein Length | 783 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640594612 |
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| Product | CheA signal transduction histidine kinase |
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| Protein accession | YP_001275357 |
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| Protein GI | 148655152 |
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| COG category | [K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.154879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGAACG ACGATGACAT CATGGCGCAG GTCTTTGCCG CCTTTTGCGA AGAGCAGGCG
GAGCATCGCG CCGCAATCGC GTCATTGTTG CTCGAAATGG AGCAGCATCC CGATCATCCC
GATGATCGCG CGCTGGTCGA CCAGCTTTTT CGCGCTGCGC ATAGCCTGAA AGGCAGCGCC
CGCGCGGCCG GTTTGCCGGG TATCGAGCAG ATTGCGCACG CCATCGAGGA TCTGTTTGCC
GCGCTGCGAG AGCGTCGCCT GCGCGTGACG CCAGCGTGGT GCGACCCGGT GTACGCCGCG
CTGGACGTGA TCGGCGTTCT GGTGGATCGG GCGATTGCCC ATCACCCGCC GGACGACGCC
CTTATCGAGA CGACGGTTCA CCGGTTGCGC GCCGTCCTTG CGCAACCGCC GTCGGAACAG
GAGTTGGCGG AACGCACAGA AGGCGCCGCA ATCCCCGGCG ACGAGACGTC GGTCGTTTCT
GCCGGTCTTC CTGCGGCGCC GACCGGCATT GGGGAGGTGA CCACCGTTCG CCTTGCGATC
GAGGTACTGG ACACCCTGCT CAACGATGTC GGCGAACTGA TGACCGGGGT GATGCGAATA
CGCGCTCAGG CGCGCCGCAT CCAGGATCTC AGCGGCATGT CGGCACCCTG GAAACGCCTC
TGGCGTCAGG TGCGCCCGCT GGTTGCACAG TATCAGGCGC GCAGCAATGC CTTCCACCCG
GTGGTGCATC ACCTGGACAT CCGTCCAATC ACCCCTGAAC GCTCTGGCGA CGGGCTTCAG
CAGCGTGACC TTCAGCAACT GGCAGGCGCA CTAACCCGTG CAGCGGCACT GATTGATGAG
ATCGATCAAC AGTTGACGGC ATGTGCGCGT GATCTTGCTG CCGATCAATC GATGTTGAGC
GCGGTCACCG ACCGACTGCA TCTCCAGATC CGGCGCGCTC GTATGCTGCC GCTGCGAACG
ATCTTTCAGC CACTGCGTCT GGTTGCGCGC GATGTCAGTC GCGGCGCCGG CAAACCGGTC
GATCTGTTTT TCGACGATGG GGGCGCGGAA GCCGATCGTC AGGTGCTCGA CACGCTGCGT
GAAGTGCTCA CCCATCTCCT GCGCAACGCC ATTGATCATG GCATCGAAGA GGCCACGGTG
CGCCAGCGCC ATGGCAAACC GGAGCGGGGG GCGGTTCGCC TGAATGCAAC CGTTGACGGC
GACTGGTTGA CGATTGAGGT TGCCGACGAT GGCGCCGGGC TGGACGATGA GGCTATCCGA
CGTCGGGCGC TCGAACTGGG TTTGCTGACG GCGACCGATC TGGAGCGTCT TACGCCGACC
GACGTTGCCA ATCTCATTTT CCTGCCGGGC TTTTCGACAC GCACAACGGC CAGCCATCTG
TCAGGGCGCG GGGTTGGTCT CGATATCGTC CATTCGCATA TCGAGCGAAT GCAGGGCCGG
ATTCAGGTGC ACAGCGCGCC AGGTGCAGGA TGTCGCTTCG TGTTGAGCGT CCCAGTTTCA
TTGACCAGCG CCCACGGCTT GCTGGTGAAA CTCGGGCAAC ACACATGCGC CGTGCCGCTG
GAGTCGATCC AGCGGATTGT GGCAGTCCAA CCCGGCGACG TGCGCGTCCT TGAAGGCAGG
ACGGTCGTTC TCGTGGACGG TCGTCCGGTG GTGCTGGTGC ATCTGGCGGA TCTGATGGAA
GCCGGTGATG GGATGAGATC ATTCTCACGC GGCGAGGAGC GCCGTCCGGC ACTGTTGCTG
GGAAGCGGCA GCGAACGCCA GGTGGCGTGT CTGGTCGATG GCGTGGTGGG TGAGCAAGAA
CTGGTGGTGC ACCGGTTGCC GTTTCCGATC AGGCGGGTGC AGTTCATTGC CGCTGCTGCC
ATCCTGCCCG ATGGCGCAAT CGCGCCAATT CTGGACACGG TTGATATTGT ACGGGCGGCA
TCGGGGGCGC AGCGTCTGCC GGCGCCGGTG ACGCCTGATA TCAGTCAACA GCGGCGCATA
CCGCAGATCC TGGTTGTGGA CGACTCGCTG ACGACACGGA TGCTGGAGAA GAACATTCTC
GAAGCGGCTG GCTACCAGGT GCATCTGGCG ACCGACGGCG TCGAAGCGCT GGATGTTTTG
CAGCGTCTAT CCACGAATGG CGGATGCGAT CTTGTGATCA GCGATATTGA TATGCCGCGA
CTGAACGGCT TTGAGTTGAC CGAGAAATTG CGCGCCGGTG AGCGTTTCAA ACACCTGCCG
GTTGTGCTGG TGACATCGCT CGATGCGCCG GAACACCGCG AACGCGGGGT GACCGTCGGC
GCGGATGCGT ATATCGTCAA GCGTGCATTT GATCAACAAA CATTGCTGGA CACCATCGCT
CGTCTGATAT GA
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| Protein sequence | MENDDDIMAQ VFAAFCEEQA EHRAAIASLL LEMEQHPDHP DDRALVDQLF RAAHSLKGSA
RAAGLPGIEQ IAHAIEDLFA ALRERRLRVT PAWCDPVYAA LDVIGVLVDR AIAHHPPDDA
LIETTVHRLR AVLAQPPSEQ ELAERTEGAA IPGDETSVVS AGLPAAPTGI GEVTTVRLAI
EVLDTLLNDV GELMTGVMRI RAQARRIQDL SGMSAPWKRL WRQVRPLVAQ YQARSNAFHP
VVHHLDIRPI TPERSGDGLQ QRDLQQLAGA LTRAAALIDE IDQQLTACAR DLAADQSMLS
AVTDRLHLQI RRARMLPLRT IFQPLRLVAR DVSRGAGKPV DLFFDDGGAE ADRQVLDTLR
EVLTHLLRNA IDHGIEEATV RQRHGKPERG AVRLNATVDG DWLTIEVADD GAGLDDEAIR
RRALELGLLT ATDLERLTPT DVANLIFLPG FSTRTTASHL SGRGVGLDIV HSHIERMQGR
IQVHSAPGAG CRFVLSVPVS LTSAHGLLVK LGQHTCAVPL ESIQRIVAVQ PGDVRVLEGR
TVVLVDGRPV VLVHLADLME AGDGMRSFSR GEERRPALLL GSGSERQVAC LVDGVVGEQE
LVVHRLPFPI RRVQFIAAAA ILPDGAIAPI LDTVDIVRAA SGAQRLPAPV TPDISQQRRI
PQILVVDDSL TTRMLEKNIL EAAGYQVHLA TDGVEALDVL QRLSTNGGCD LVISDIDMPR
LNGFELTEKL RAGERFKHLP VVLVTSLDAP EHRERGVTVG ADAYIVKRAF DQQTLLDTIA
RLI
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