Gene RoseRS_0987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0987 
Symbol 
ID5207933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1209283 
End bp1210035 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID640594601 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001275346 
Protein GI148655141 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.348394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTT CTCTCAAAGA CAGGATCGCG GTGGTCACCG GCGGATCGCG CGGGATCGGG 
CGAGCGATTG CGATGACCCT GGCCGCCGCC GGTGCAACGG TCGTCGTCAA CTATCAGCGC
AACGCCGCCG CAGCCGACGA AACCGTCGCT GCGATTACCG CCGCCGATGG CGCAGCGATC
AGCATTCAGG CGGATGTGAG CGTATCCGCC GATGTCGAGC GATTGTTCAA GACGGTGCTC
GATCAGTATG GCACGGTCGA TATTCTGGTC AACAATGCTG GCATCACCCG TGACACACTG
CTGCTGCGCA TGAAAGAAGA CGATTTCGAC ACCGTTATCG ACACCAACCT GCGCGGCGTC
TATCTCTGCA CGAAGGCCGC GCTGCGACCA ATGACCAGGG CGCGCAGCGG GCGCATCATC
AACATCACGT CGGTAGTGGG ACTGATCGGC AATGCGGGGC AGAGCAACTA CGCCGCCGCA
AAAGCCGGGA TCATCGGCTT CACCCGCGCG GTTGCACGCG AAATGGCGTC GCGCGGCATT
ACGGTCAACG CAGTGGCGCC TGGCTATATC GAAACCGAGT TGACCGCCGG GCTCGGCGAA
CAGGTACGCG CCGCCATTCT CGAAGCCATT CCACTGGGGC GCCTCGGTAC GCCGCAGGAC
GTAGCCAATC TGGTCTGCTT CCTGGCATCC GACGCGGCCG CATACATCAC CGGTCAAACG
CTGACCGTCG ATGGCGGTAT GGTCATGAAC TAG
 
Protein sequence
MQISLKDRIA VVTGGSRGIG RAIAMTLAAA GATVVVNYQR NAAAADETVA AITAADGAAI 
SIQADVSVSA DVERLFKTVL DQYGTVDILV NNAGITRDTL LLRMKEDDFD TVIDTNLRGV
YLCTKAALRP MTRARSGRII NITSVVGLIG NAGQSNYAAA KAGIIGFTRA VAREMASRGI
TVNAVAPGYI ETELTAGLGE QVRAAILEAI PLGRLGTPQD VANLVCFLAS DAAAYITGQT
LTVDGGMVMN