Gene RoseRS_0985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0985 
Symbol 
ID5207931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1208435 
End bp1208863 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content59% 
IMG OID640594599 
ProductNusB antitermination factor 
Protein accessionYP_001275344 
Protein GI148655139 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0784851 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGTT TACGTCGCCG GGTGCGCGCA ATCGCGCTAC AGATTTTGTT TGAACTGGAT 
GCGACCGATC ATTCGCCGGA TCAGGTCGTG GCGCGTCGCC TTGAAGAGGA GCGCCTTCCG
CCGGAGGGGG AGCGTTTTTT GCGGCGCCTG GTCTTTGGCG CCTGGGAGCA TGCGTCATAT
CTGGACCGTA TTATCGAAGA AACTGCGCCG AACTGGCCCG TCAGTCAGAT GCCCGGCGTC
GATAAAGCTA TTTTGCGAAT TGCGCTCTTT GAGGCGCTGA TCGATGAGGA GGAAAAAACG
CCGCTGAAGG CGATCATTAA CGAGGCGGTG GAGCTGGCCA AGCAGTACGG CAGCGATAAT
TCGAGCCGGT TTGTCAACGG CGTCCTCGGC ACGGTCGTCA GTCGCTATCG CGAGCGGCGC
AAAGGATAG
 
Protein sequence
MASLRRRVRA IALQILFELD ATDHSPDQVV ARRLEEERLP PEGERFLRRL VFGAWEHASY 
LDRIIEETAP NWPVSQMPGV DKAILRIALF EALIDEEEKT PLKAIINEAV ELAKQYGSDN
SSRFVNGVLG TVVSRYRERR KG