Gene RoseRS_0973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRoseRS_0973 
Symbol 
ID5207919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus sp. RS-1 
KingdomBacteria 
Replicon accessionNC_009523 
Strand
Start bp1197000 
End bp1197269 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content55% 
IMG OID640594587 
Producthydrogenase assembly chaperone hypC/hupF 
Protein accessionYP_001275332 
Protein GI148655127 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0298] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00074] hydrogenase assembly chaperone HypC/HupF 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.82669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTCTCG GCATCCCCGG ACAGGTCAAA GAAATCTATG AGATGAACGG CATCCGCATG 
GGCAAAGTCG ATTTCAACGG CATTGTCAAA GATGTGTGCC TGGCATACCT GCCCGATATC
AACGTTGGCG ACTATACGAT TGTGCATGTC GGATTTGCCA TCACGCGCCT CGATGAACAG
TCGGCGCTGG AGACCCTGGC GTTGTTCGAG AGCATCGGCT TGCTCGACGA AGAGTTGCGC
ACCGATTCGG CGAAGGAGGA AGCGGCGTGA
 
Protein sequence
MCLGIPGQVK EIYEMNGIRM GKVDFNGIVK DVCLAYLPDI NVGDYTIVHV GFAITRLDEQ 
SALETLALFE SIGLLDEELR TDSAKEEAA