| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0960 |
|---|
| Symbol | |
|---|
| ID | 5207906 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | - |
|---|
| Start bp | 1183817 |
|---|
| End bp | 1184593 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640594574 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_001275319 |
|---|
| Protein GI | 148655114 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCCG CCAAGTTTAC CCCGCCCGAA GGTCAGATCG GCATCGATCT CGAAGGCGAC
CCGGACAACG AGGTGGTGCG GATCAGCGTA TGGGACACCG GCATTGGCAT CGCGGCTGAG
GATATGCCGC GCCTGTTTCA GCCATTTTCA CAGATCGACA ATGTGTATCA ACGTGATCAG
GCGGGGAGCG GCCTGGGGCT GGTCATCGTT GCGCGCCTGG CGGAACTTCA TGGCGGCGGC
GTCACTCTCG TCAGCGAACC GGGGAAAGGC AGCCGCTTTA CTATCACGCT GCCGTGGACT
CGTCACCATC AGATGTGGCG CCCGGAGTCG CTCGACGCTG GTGAAACCTC CCGTTCTGAG
TTGGACGAAG AACCACTCCC ACAGTCATAC AGCAATGATC ATATCCTGTT GATTGATGAC
GATGGAAAAG GGAGCGCGGT GATCGGTGAT TATCTCCAGC GTTGCGGCTA TTGCGTCACG
CACGTCGTTT CGGGTGAAGA GGGATTGGCG CTGGCACATC ACGAACCGCC GGACATTGTA
ATCGTCGATC TGCGATTGCG TGGTCTGGAT GGATTGGATG TCATCCGGCG ACTGCGCGCC
GACGTCGCAG CCAGCACCCT GCCGATCATT GCGCTTACCG CGCTGGCGAT GCCGGGCGAC
CGTGAACGCA GTCTGGAAGC GGGCGCCGAT GTGTATCTGA GCAAACCGGT GCGTCTGCGA
CGCCTGGCTG AGGAGATCGC TGCGCTGCTG GGACAAAACC CGACACAGCG GCGGTAG
|
|---|
| Protein sequence | MNAAKFTPPE GQIGIDLEGD PDNEVVRISV WDTGIGIAAE DMPRLFQPFS QIDNVYQRDQ
AGSGLGLVIV ARLAELHGGG VTLVSEPGKG SRFTITLPWT RHHQMWRPES LDAGETSRSE
LDEEPLPQSY SNDHILLIDD DGKGSAVIGD YLQRCGYCVT HVVSGEEGLA LAHHEPPDIV
IVDLRLRGLD GLDVIRRLRA DVAASTLPII ALTALAMPGD RERSLEAGAD VYLSKPVRLR
RLAEEIAALL GQNPTQRR
|
|---|
| |