| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0949 |
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| Symbol | |
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| ID | 5207895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 1170885 |
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| End bp | 1173128 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640594563 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001275308 |
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| Protein GI | 148655103 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGAAC GTCAGATTCA TTCAGTCAGT ATGGAACTCG CAGGGCGCAC GCTCACCCTG
GAGGCGGGGC GCTTCGCTGA GCAGGCGAAT GGCGCTGTTG TCGTGCGCTA TGGCGATACG
ATGTTGCTGG CGACGGCGGT CGCCTCGAAG GAGCCGCGCG CCGACGCCGA TTTCTTTCCG
TTGACCGTCG ATTACGAAGA GAAGATGTAT GCTGCCGGCA AAATTCCCGG CAGTTTCTTC
AAGCGCGAAG GGAAGCCGAC CGATAGTGCG ATCCTGACCG CGCGGCTCAC CGATCGTCCG
CTGCGCCCGC TCTTCCCGGA AGGCTACCGC AATGAGGTGC AGATCATCGT CACGACCTTT
TCGATTGATA TGGTGAACGA TCCGGCGCCG CTGGCGATCA TCGGCGCTTC GGCGGCGCTG
GCAATCTCCG ATATTCCGTT CCTGGGACCG GTCGGTGCGG TGCAGGTCGG GTACATCGAT
GGGAAGGTGC AGATCAACCC TGAGATGCCT GATATGCCGA ACAGCGATCT CGATCTGGTG
GTTGCCGGGA CGAAGGATGC GGTGCTGATG GTCGAAGCGG GGGCGAAGGA ACTCCCGGAA
GACCTGATGC TCGAAGCGAT CATTCAGGGG CATCAGGTAT GCAAGCAGAT CTGCGATTTG
CAGAATGAAC TGGTGCGCCT GGCCGGTCGC CCGAAGCGCG AGTTCGTTCC GCCGCCGGTC
GATACGTCAC TGGAAGAAGC GATCCAGCAG TGGTTGGGGA ACCGGCTGTA CGAGGCGATC
ACCGACCCGA ACAAGATGGT GCGCGACGCG CAAACTGAGG CGCTGAAGCA GGAGGTGATC
GCGCATTTCA CCGCCGATGA GCCGGAGGAG GAACTCGAAG CGCGCATCGC TGCCGTTTCG
ACAGCGTTCG AGAATCTGCT GTACGAAGAG GTGCGGCGCA TGATCCTCGA ACGTGGCGAG
CGCGTCGATG GACGTGGTCC AAAGGACATC CGCCCGATTT CGATTGAGGT CGGGCTGATC
CCGCGTGTAC ACGGGTCGGG GCTGTTCACC CGCGGTCAGA CGCAGGTGCT GACGCTGGCG
ACGCTCGGTT CGCCAGCTGA GGAGCAGCGC CTCGATGATC TGGGGATCGA GACGACCAAA
CGCTACATCC ATCACTACAA CTTCCCGCCG TTCAGCACCG GCGAGGTGCG ACGCCTGGGG
TCGCCGCGCC GCCGCGATAT TGGTCACGGT GCACTGGCGG AGCGTTCGTT GCTTGCGGTG
CTGCCGTCGA AGGAGGAGTT TCCCTACACG ATGCGTCTGG TTTCGGAAAC TCTCTCGTCG
AACGGCTCCT CGTCGATGGC GTCGGTCTGC GGATCGTCGC TGGCGCTGAT GGATGCAGGC
GTGCCGATCA AGGCGCCGGT GGCCGGTGTG GCGATGGGTT TGATTACCGG CAAGGATGGG
CGCTGGCGCG TGCTCACCGA TATTCAGGGG ATCGAGGATC ATCTGGGCGA TATGGATTTC
AAGGTCGCCG GAACGGCAAA GGGTGTCACC GGTTTGCAGC TGGACATCAA AACCACCGGC
ATTACCTACG AGATTATGCG CGAGGCGTTC GCTCAGGCGC GCGAGGGTCG CCTGTACATC
CTCGACAAGA TGAATGCGGT GATCAGCGAG CCGCGCAAAG AACTGTCGCC ATACGCGCCA
CGTATCATTA CGTTGCAGAT CAACCCGGAG AAGATCGGTG CGCTCATCGG GCCAGGCGGA
AAGACGGTTC GAGGTATTAC CGAAGCAACC GGCGCGCAGA TCGATATCGA GGAGGATGGA
CGGGTCTATA TTTCGACGCC CGATGCCGCA GCCGCGCAGC AGGCGGTTGC GATGGTCGAG
GCGCTGACCC GCGAGATCAA GGTCGGTGAT ATTTTCCTTG GCAAAGTGGT GCGAATCATG
CCGTTTGGTG CATTTGTGAA CCTTGCGCCG GGGAAGGATG GCATGGTGCA CGTCTCCGAA
CTCGATGTCG GGCGGGTTGA GAATGTCGAG GACGTTATCA AGATGGGGGA TGAGATCAAC
GTCATGGTGA TCGGCATCGA ACCCGGCACC GGCAAGGTCA GTCTCTCACG GCGGGCGCTG
CTGACCGGCG AAACGGCGGA GGATCGGCGC GCGGCTGGCG CGGGGCGCGG TCTGCGCGAT
GGTGGCGGAC GGAGCGGCGG CAGCGACCGG GGCGGCGACC GGGGTCCGCG CGGCGATGAC
CGCCAGCGCC CGCGACGACG GTAG
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| Protein sequence | MSERQIHSVS MELAGRTLTL EAGRFAEQAN GAVVVRYGDT MLLATAVASK EPRADADFFP
LTVDYEEKMY AAGKIPGSFF KREGKPTDSA ILTARLTDRP LRPLFPEGYR NEVQIIVTTF
SIDMVNDPAP LAIIGASAAL AISDIPFLGP VGAVQVGYID GKVQINPEMP DMPNSDLDLV
VAGTKDAVLM VEAGAKELPE DLMLEAIIQG HQVCKQICDL QNELVRLAGR PKREFVPPPV
DTSLEEAIQQ WLGNRLYEAI TDPNKMVRDA QTEALKQEVI AHFTADEPEE ELEARIAAVS
TAFENLLYEE VRRMILERGE RVDGRGPKDI RPISIEVGLI PRVHGSGLFT RGQTQVLTLA
TLGSPAEEQR LDDLGIETTK RYIHHYNFPP FSTGEVRRLG SPRRRDIGHG ALAERSLLAV
LPSKEEFPYT MRLVSETLSS NGSSSMASVC GSSLALMDAG VPIKAPVAGV AMGLITGKDG
RWRVLTDIQG IEDHLGDMDF KVAGTAKGVT GLQLDIKTTG ITYEIMREAF AQAREGRLYI
LDKMNAVISE PRKELSPYAP RIITLQINPE KIGALIGPGG KTVRGITEAT GAQIDIEEDG
RVYISTPDAA AAQQAVAMVE ALTREIKVGD IFLGKVVRIM PFGAFVNLAP GKDGMVHVSE
LDVGRVENVE DVIKMGDEIN VMVIGIEPGT GKVSLSRRAL LTGETAEDRR AAGAGRGLRD
GGGRSGGSDR GGDRGPRGDD RQRPRRR
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