| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0946 |
|---|
| Symbol | |
|---|
| ID | 5207892 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus sp. RS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009523 |
|---|
| Strand | + |
|---|
| Start bp | 1166912 |
|---|
| End bp | 1167883 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640594560 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
|---|
| Protein accession | YP_001275305 |
|---|
| Protein GI | 148655100 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCATGA TGACACCTGC ATCCCCTGAT CGTCCACGTA TCTGGACTGA TGTTCGCCTG
GAAGCGGAGG CGGTTGCGTT GCTCGAACCG CATGCCACGC TGGTCGCAGG CGGTGACGCT
GCGCTGTTGC CCGGTTGCAC TGTTGCCATT ATCACCGCGC TGATCGACGC CAATGGCGCA
TGGATGGACG CAGCTGGCGA CGCACTGCGG GCAATCTGTC GTCCCGGCAT TGGCGTCGAT
AACATCGATA TCGCTGCCGC CACAAAGCGT GGCATTCTGG TCATCAACAC GCCCGATGGT
CCTACCGAGA GCACCGCTGA ACATGCCGTC GCATTGCTCT TAGCGCTGGC GAAGCAGGTC
GTTGCGTCCG ACCGCGTTCT GCGCACTGAA GGGTGGCGCG CCGCCCGGTT ACGGGGCATC
GAGGTGCGCG GTAAAACGCT GGGCATTGTC GGGTTGGGGC GCATCGGGCG GCGCGTGGCG
CAGATCTGTC GCCAGGGGCT GGGGATGCAT GTTGTGGCGT ATGACCCGCC TGTTCCCGAC
GAAACCTTCG CTACCCTGGA TGTGGCGCGC GCCGCAACCC TCGACGACCT GCTGCCGCAT
GCGCAGTTCC TCTCACTTCA CTGCGCGCTG ACGCCGGAAA CCCGCCACCT GATCGGTGCA
CGTGAACTTG GATTGCTGCC GCCGGGCGCG CTGCTGATCA ACGTCAGCCG TGGGGCGGTC
GTCGATCAGG CGGCGCTGAT CGCAGCGCTG AGCGATGGAC GTCTGGCGGG CGCCGGTCTC
GATGTCTTCG ACCCGGAGCC GCTACCGGAC GATCATCCGC TGCTGCGACT GCCGAACGTC
ATTCTGACGC CGCATATCGC TTCGTACACT GCTGATGGCG CGCGCGCCAT GCATATTGGG
GTGGCGCAGC AGGTTGTTCA ACTGCTGCGC GGCGAACGCC CGCCGCATAT CGTCAACCCG
GAAGCATGGT AG
|
|---|
| Protein sequence | MPMMTPASPD RPRIWTDVRL EAEAVALLEP HATLVAGGDA ALLPGCTVAI ITALIDANGA
WMDAAGDALR AICRPGIGVD NIDIAAATKR GILVINTPDG PTESTAEHAV ALLLALAKQV
VASDRVLRTE GWRAARLRGI EVRGKTLGIV GLGRIGRRVA QICRQGLGMH VVAYDPPVPD
ETFATLDVAR AATLDDLLPH AQFLSLHCAL TPETRHLIGA RELGLLPPGA LLINVSRGAV
VDQAALIAAL SDGRLAGAGL DVFDPEPLPD DHPLLRLPNV ILTPHIASYT ADGARAMHIG
VAQQVVQLLR GERPPHIVNP EAW
|
|---|
| |