Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0943 |
Symbol | |
ID | 5207889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | + |
Start bp | 1163302 |
End bp | 1164789 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640594557 |
Product | phytoene dehydrogenase-related protein |
Protein accession | YP_001275302 |
Protein GI | 148655097 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.988075 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCACCG TTATCGTCAT TGGGGCCGGT TTTGGCGGCC TTGCAGCCGC CGTGCGCCTG GCAGCGCGCG GCCACGACGT GCACATTTTC GAGAAGCAGG ATAAGCCGGG CGGTAAGGCG TATGTTCTGG AGGTGGACGG CTTCCGCTTC GATACCGGTC CGACGGTCAT CACGGCGCCG TTCATGTTTG ATGACCTGTG GCGAGCGGCG GGTCGTCGGC GCGAGGAGTA TGTCGAATTC CGCCCGTGCC ACCCGTTCTA CCGCATCTAT GACCATACCG GTCGTCGGTT CGATCACAGC GCCGATGAAG CGGCAGTACT GCGCGAGATT GAACGCATCA ACCCCGCCGA TGTCGAGGGG TATCGGCGTT TTCTGGCGAG CACGCGCTCC ATCTTCGAGA AAGGATTCGT TGAACTTGCG GACAAGCCAT TCCTGCACTT CCGCGATATG CTGCGCGTGA CGCCCGATCT CATCCGCCTG CGATCATTCG AGAGCGTCTA CCGCTATGTG TCGCGCTATA TCAAGGACGA CTTTCTGCGG CGCTGTTTTT CGTTCCATCC GCTGTTCATC GGCGGCAACC CGTTCTATGC TTCGTCGATC TACTCTATGG TGCATTACCT GGAGCGTGAA TGGGGGGTGT ACTACGCCGT CGGCGGCACC GGCGCAATCG TGGATGCTCT GGTGCGCCTC CTGCGTGAAC TCGGCGTTGC CATCCATCTC AACGCTGAGG TGCGCGAGCT GATCGTCGAA GGGCGTCGCA TCCGCAGTGT GGCGCTTGCC GACGGCAGCG AGTATCGCGC CGATATTGTT GTGTCGAATG CCGATGTCGC CCATACCTAC GCCGACCTGA TCGCGCCACG CTACCGCCGT CGCTATACCG ACCGTCGCCT GCGCTCGTTG AAGTACAGTA TGTCACTGGT TGTGATCTAT CTTGGAACAC GGCGCACCTA CCACGATGCT CCACTGGTGC GTCACAATAT CATCTTTGGT CCACGTTACC GTGAACTGCT TGATGATATT TTCATCCACA AACGTGTTGC AGAAGATTTC TCGCTTTACC TGCACATGCC GTCGCGCGAT GAGCCGGATG TGGCGCCGCC CGGTTGTGAT GCATTCTACG TCCTGTCGCC GGTGCCCAAC CTGGCGTCGC AGGCGGATTG GGCGTCGCTG GCGCGTCCAT ATCGTGATGC CATCATCGCA TTCCTGGAGG AGCGTTTTCT CCCCGATTTG AGCAAGAACA TCGTCGTGGA GCGTATAGCC GACCCGCGCT ACTTTCAGCG GCGTCAGAAC AACTACTTTG GCGCGGCGTT CGCGTTCGAG CCGACGTTGC TGCAATCCGC CTGGTTCCGC CCGCATAATC GCTCTGAAGA GTTCGACAAC CTGTACTTCG TGGGCGCCGG AACCCACCCT GGCGCAGGAT TGCCAGGCGT GTTATCATCG GCGCTGATCG TCGAGCGTCT GGTGCAGCAA GAGTGTGTCG GGAGGTGA
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Protein sequence | MSTVIVIGAG FGGLAAAVRL AARGHDVHIF EKQDKPGGKA YVLEVDGFRF DTGPTVITAP FMFDDLWRAA GRRREEYVEF RPCHPFYRIY DHTGRRFDHS ADEAAVLREI ERINPADVEG YRRFLASTRS IFEKGFVELA DKPFLHFRDM LRVTPDLIRL RSFESVYRYV SRYIKDDFLR RCFSFHPLFI GGNPFYASSI YSMVHYLERE WGVYYAVGGT GAIVDALVRL LRELGVAIHL NAEVRELIVE GRRIRSVALA DGSEYRADIV VSNADVAHTY ADLIAPRYRR RYTDRRLRSL KYSMSLVVIY LGTRRTYHDA PLVRHNIIFG PRYRELLDDI FIHKRVAEDF SLYLHMPSRD EPDVAPPGCD AFYVLSPVPN LASQADWASL ARPYRDAIIA FLEERFLPDL SKNIVVERIA DPRYFQRRQN NYFGAAFAFE PTLLQSAWFR PHNRSEEFDN LYFVGAGTHP GAGLPGVLSS ALIVERLVQQ ECVGR
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